Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g01205 ATGTTGGAGCCACCGGAGCCGGAGGAGGAAGCTGCTAGTTCTACGGCGGTGGGGTCGGACGGTGGCGATGGAGGAGTTGAGAAGGAACACATGTTCAACAAAGTGGTGACGCCGAGTGATGTTGGGAAATTGAACCGGCTAGTGATTCCAAAGCAACACGCTGAGAGATTTTTCCCCTTAGATTCATCAACAAACGACAAGGGTTTGCTCTTAAATTTCGAAGATCGCAACGGCAAATCATGGCGGTTCCGTTACTCCTACTGGAACAGTAGCCAAAGCTACGTTATGACCAAAGGCTGGAGTCGCTTCGTCAAAGAGAAGCGCCTCGACGCCGGTGATACCGTTTCCTTCCAACGTGGGGTTGGTGAAATTGGAAGAGATCGTCTTTACATTGACTGCCGCCGTGGCCGCCGCCATGAACTTCCCTTTCACCACCACTCTCCCACCACAGTCAGCATCCAACCAAGCATCATCGTCCCAGCAAGCGCCACCGCTTGGGGGCCATTCGTGTGGCAGCCACTCAGCGCCACAACACCTCAATACCTCCCCCATCTGCAAGATCCCACATCGAATAGAGAGTGTTGTCCATATCCATACGGGAGTGTTGAAACATCTGGAATGATGTTTTTGAGGACAGAGGGAAGAAGGGTAGCCCCAAGATTAGGGGATGAGAGGGAGGTGGAGGTGGAGCCGAGTGGCGGCAACGGCGGCGGTGGTAATTCAATGACGGTGGTTGAAGATACTCCAGCAAAGAGATCAAGACTGAGGCTGTTTGGTGTAAACATGGAGATGGAGGATCCAATTTCATTAACTTCTGATGAATGCGAATTATTATTGTTTTCTTCAAATTCAAACCCCAAATTGGCTTCCTCTTCGTCAAATTAG 885 50.85 MLEPPEPEEEAASSTAVGSDGGDGGVEKEHMFNKVVTPSDVGKLNRLVIPKQHAERFFPLDSSTNDKGLLLNFEDRNGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFQRGVGEIGRDRLYIDCRRGRRHELPFHHHSPTTVSIQPSIIVPASATAWGPFVWQPLSATTPQYLPHLQDPTSNRECCPYPYGSVETSGMMFLRTEGRRVAPRLGDEREVEVEPSGGNGGGGNSMTVVEDTPAKRSRLRLFGVNMEMEDPISLTSDECELLLFSSNSNPKLASSSSN 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9362991 9363875 - Carg21329-RA Car15g01205 163042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g01205 294 MobiDBLite consensus disorder prediction 1 27 - -
Car15g01205 294 Pfam B3 DNA binding domain 32 135 IPR003340 GO:0003677
Car15g01205 294 MobiDBLite consensus disorder prediction 219 248 - -
Car15g01205 294 ProSiteProfiles B3 DNA-binding domain profile. 32 137 IPR003340 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00683 Car-Chr4:3966772 Car15g01205 Car-Chr15:9362991 1.89E-48 dispersed
Car06g00437 Car-Chr6:2421078 Car15g01205 Car-Chr15:9362991 5.31E-44 dispersed
Car15g01205 Car-Chr15:9362991 Car17g00502 Car-Chr17:4446191 2.58E-63 dispersed
Car15g01205 Car-Chr15:9362991 Car02g00707 Car-Chr2:5225614 4.82E-100 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4877 PF02362 B3 4.00E-28 CL0405 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g01205 - - cpep:111783957 533.872