Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g01214 ATGGAAGGGGTTGGAGGTGGGTCGGGATCGGAATTGTTTGGAGTTACGCCGTCGTTGACTGTCGATGTTGTAAGTGATTCTCAGCCAGTGGAAGCTGCTTCTCCAATTAGTAGTCGACCTCCTGCATCGTCTTCGTTGAATTATGAGGAACTCATTCGCGGTGGAGGACAGATGGCGATTGATGACGACGCGCTTGTCGGAGAAGATGCTGGCGGCGGTAGCGGCAGCGGCGGCGGCGGCGGCTCGGCTGGGAATCGTTGGCCTCGTCAAGAAACTCTTGCGTTGCTTAAAATTAGATCGGATATGGATTCCGCCTTCCGTGATGCTACCCTCAAAGGTCCTCTTTGGGACGAAGTCTCCAGGAAGCTCGGGGAAATGGGTTATGCAAGAAATGCGAAGAAATGCAAGGAGAAATTTGAGAATGTACAGAAGTATTACAAGCGCACAAAGGAAGGGCGAGGAGGGCGTGGAGATGGGAAGACGTACAAATTCTTTACGCAGCTTGAGGCGCTACACAACGCCGCATCTCAAAACGTGGCATCATCGGGCTTCGGGATTAGCAACCCAACTCCAATCTCAGCCGTCAAAATCTCACAAACCCCAATGGGAATCTTTTCTCCGCCGCCCACCATCGCCGCTCCAATGGGTGTCAGCTTTTCATCCGACACCTCATCTTCATCAACAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGATGGGTTTTGACGTTGAAGGAGAGCCGTCGAGTGTGGCGGGAAGTAGCCGGAAGCGGCGGCGGAGAGGGGCGGTTAAGGGAAAAAGTGGTGGGCGGAGGAGAAGGCATAAGATGATGATGGGGTTTTTTGAGGGTTTGATGAAGGAAGTGGTGCAGAAACAGGAAGCTATGCAACAGAGATTCCTGGAAGCGATTGAGAGAAGAGAAGAGGAGAGAATGATGAGAGAAGAGACATGGAAGAGGCAAGAAATGGGGAGATTAAGGGAGGAACAAGAAAAAATGGCTCAAGAACGGACAATTTCTGGGTCTAGAGATGCGGCCATAATTGCTTTTCTTCAGAAATTCACAGGCCAAACCATTGAATTACCGTCAGTGAATATCTCTCCTTCAGCCCCACAACAACACTATGATCTGTCAGTGCCTGTCCCTGCGCCCACGCCTGTCGCTATGCCACTATCCCCTGTCCCCCCACCTCCGCCATTGAAAACCCAGCCGCCTCCAAATGCAATGCCGTTTTTGGATCACCCAATATCAATATCAAATCAGGAAAGCAGCAGCCATGGCGGCCGGGGAGATGGCCCTTCAGAACCCATTTCTTCAAGATGGCCTAAACCCGAAGTTCTAGCGCTAATTAAGCTGCGAGGTGGGCTTGAATCAAGATATCAAGAAATGGGTCCTAAGGGCCCTCTTTGGGAAGAGATTTCAGCTGGAATGAACCGATTGGGTTACAAAAGAAGCGCCAAAAGATGCAAGGAAAAATGGGAGAATATCAACAAATACTTCAAGAAAGTTAAAGAAAGCAACAAAAAACGCCGCGAGGATTCCAAAACTTGCCCCTATTTCGATGAACTCGACGCTCTTTACCGGAAAAAGATCCCCACTGCCGGTGGTTCTGACGGTGGCGCCTCCTTTAGCGACACCGCCAAATTACAACAAACCCACATCCAAATGCCTCATACCACACCCGCTGAAGAACAACCACCACCACCGCCTCCGCCGTCGTCACCACCACCCACAAAGCCAGAAGACATTGTGAATGAGTTGATGGAGCTTCAGAACCTTTACCATGTCGATCAAGTCGACGACGACGATGACGACAACGACAACGACGACAACGACAACACCCGAGAAGAAAAGAGAAGGAACATGGATTACAAAATGGAGTTTCAGACAAGTGAGTTTCAATCAATGGCGGTGGTTCAATAA 1926 50.52 MEGVGGGSGSELFGVTPSLTVDVVSDSQPVEAASPISSRPPASSSLNYEELIRGGGQMAIDDDALVGEDAGGGSGSGGGGGSAGNRWPRQETLALLKIRSDMDSAFRDATLKGPLWDEVSRKLGEMGYARNAKKCKEKFENVQKYYKRTKEGRGGRGDGKTYKFFTQLEALHNAASQNVASSGFGISNPTPISAVKISQTPMGIFSPPPTIAAPMGVSFSSDTSSSSTEEEEEEEEEEEEMGFDVEGEPSSVAGSSRKRRRRGAVKGKSGGRRRRHKMMMGFFEGLMKEVVQKQEAMQQRFLEAIERREEERMMREETWKRQEMGRLREEQEKMAQERTISGSRDAAIIAFLQKFTGQTIELPSVNISPSAPQQHYDLSVPVPAPTPVAMPLSPVPPPPPLKTQPPPNAMPFLDHPISISNQESSSHGGRGDGPSEPISSRWPKPEVLALIKLRGGLESRYQEMGPKGPLWEEISAGMNRLGYKRSAKRCKEKWENINKYFKKVKESNKKRREDSKTCPYFDELDALYRKKIPTAGGSDGGASFSDTAKLQQTHIQMPHTTPAEEQPPPPPPPSSPPPTKPEDIVNELMELQNLYHVDQVDDDDDDNDNDDNDNTREEKRRNMDYKMEFQTSEFQSMAVVQ 641
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9473753 9476573 - Carg20801-RA Car15g01214 163051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g01214 641 MobiDBLite consensus disorder prediction 562 580 - -
Car15g01214 641 Pfam Myb/SANT-like DNA-binding domain 440 527 IPR044822 -
Car15g01214 641 Pfam Myb/SANT-like DNA-binding domain 85 171 IPR044822 -
Car15g01214 641 MobiDBLite consensus disorder prediction 256 276 - -
Car15g01214 641 ProSiteProfiles Myb-like domain profile. 85 143 IPR001005 -
Car15g01214 641 MobiDBLite consensus disorder prediction 226 245 - -
Car15g01214 641 MobiDBLite consensus disorder prediction 415 429 - -
Car15g01214 641 MobiDBLite consensus disorder prediction 540 560 - -
Car15g01214 641 MobiDBLite consensus disorder prediction 532 641 - -
Car15g01214 641 MobiDBLite consensus disorder prediction 613 627 - -
Car15g01214 641 MobiDBLite consensus disorder prediction 213 277 - -
Car15g01214 641 MobiDBLite consensus disorder prediction 391 443 - -
Car15g01214 641 MobiDBLite consensus disorder prediction 64 87 - -
Car15g01214 641 MobiDBLite consensus disorder prediction 391 412 - -
Car15g01214 641 MobiDBLite consensus disorder prediction 26 45 - -
Car15g01214 641 ProSiteProfiles Myb-like domain profile. 440 498 IPR001005 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00715 Car15g01214 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00058 Car-Chr10:255729 Car15g01214 Car-Chr15:9473753 1.56E-09 dispersed
Car11g00038 Car-Chr11:192227 Car15g01214 Car-Chr15:9473753 2.71E-11 dispersed
Car13g00293 Car-Chr13:5407009 Car15g01214 Car-Chr15:9473753 1.14E-18 dispersed
Car15g01214 Car-Chr15:9473753 Car20g00935 Car-Chr20:10205691 7.88E-21 dispersed
Car18g00853 Car-Chr18:9572117 Car15g01214 Car-Chr15:9473753 1.03E-19 dispersed
Car15g01214 Car-Chr15:9473753 Car02g00715 Car-Chr2:5313359 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4878 PF13837 Myb_DNA-bind_4 7.50E-23 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g01214 - - cmos:111435698 1029.24