Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g01215 ATGGGTTTGCTTCGGTTTTTTAGAGTGAAGAGGAAATCGAAAGTTGCTGATAAAAAAACCGTTCTTGATGCTGAAATTCAGCCTGGTTTTGGTGCTAGGAAGTTCCGGTGGACTGAAATCGAGGCTTTTACTAAGAATTTCTCCACTGTTGTCGGCTCCGGCGGCTTCAGTAACGTCTATCTTGCTCGGACAGCGCCGGGGATGTCGGCGGCGGTTAAGATTTTGGGTGCTAGTGAGCGGCTCAACCGGATGTTCCGGCAGGAATTGGACATTCTTCTGCAGCTCCGACACCGGAATATTGTCACTTTCCTTGGGTTTTGCGATGAACGAGATGAAGGAGCTTTGGTCTTCGAATATGTCTCCAATGGGAGCTTGCAAGAGAAGCTCCACAGCCGGCTGCCGGCGGCGAAGACAGCGGTGCCGGTTCTTCCATGGAAAATCCGGTTAGCCATAGCCTTTCAGTTAGCTCAAGCAATCGAATACCTCCATGAAAAATGCAGTCTACAAATCGTTCACGGCGATATAAAATCATCGAACATTTTACTGGACGAACGCTTCAATTGCAAACTCTGTGATTTTGGGTCAGCGAAAATGGGATTCTCATCGGCGGTAGCGAATCCGTCGTCGTCGTCATCGCCGTCGAGCCCCTTCAGAGCGAAGCAATGGATGATGGGATCTCCCGGTTACACAGATCCCCAATACTTAAGAACCGGAATCGCCTCAAAGAAGAACGACATTTACAGTTTCGGCGTGGTGGTTTTAGAGCTAATCACCGGAAAAGAGGCTTTCTGCTCGGAGAAGGGTCTGATTCTGACTTCAATTTTACCTCCAGCAGTTCGCGACGGCGAAGGAATTAAACCGTCGGCGGTGGCGGAACTGGTGGATCCGCGGCTCCGGGGAGAATTCGACAGCAATGAAGCCGGAGCGTTGCTTTCAATCGCAGCCGCCTGCTTAGCGCAGCCGCCCGCACCGAGGCCGGTGATCGGAGGCGTGCTGCAGATGATGACGGAGAAGATCGTGAATGTGAGCGATGGGGTATGGGCGGGGAAACGTGGCAGTAAATTATTGGATATGGGGAGATGGTAA 1086 51.47 MGLLRFFRVKRKSKVADKKTVLDAEIQPGFGARKFRWTEIEAFTKNFSTVVGSGGFSNVYLARTAPGMSAAVKILGASERLNRMFRQELDILLQLRHRNIVTFLGFCDERDEGALVFEYVSNGSLQEKLHSRLPAAKTAVPVLPWKIRLAIAFQLAQAIEYLHEKCSLQIVHGDIKSSNILLDERFNCKLCDFGSAKMGFSSAVANPSSSSSPSSPFRAKQWMMGSPGYTDPQYLRTGIASKKNDIYSFGVVVLELITGKEAFCSEKGLILTSILPPAVRDGEGIKPSAVAELVDPRLRGEFDSNEAGALLSIAAACLAQPPAPRPVIGGVLQMMTEKIVNVSDGVWAGKRGSKLLDMGRW 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9487865 9489624 + Carg20802-RA Car15g01215 163052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g01215 361 Pfam Protein kinase domain 49 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g01215 361 ProSitePatterns Protein kinases ATP-binding region signature. 51 73 IPR017441 GO:0005524
Car15g01215 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Car15g01215 361 ProSiteProfiles Protein kinase domain profile. 45 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00716 Car15g01215 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g01215 Car-Chr15:9487865 Car04g00456 Car-Chr4:2587998 4.13E-57 dispersed
Car15g01215 Car-Chr15:9487865 Car02g00716 Car-Chr2:5323192 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89410 PF00069 Pkinase 4.30E-40 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g01215 - - cmax:111468884 664.455