Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g01247 GTGAGTTTGTGTTGTTTTGCTTTTGAACCGATCTTTTTTCTTTCTGTCACTGTAAAAATGGAGGAGAAAGAGGGAGTGGATTTTGGATTTGCAGTAGAAGTGAGCCAAGCTCCAGAGAGCTTAGGAATGATGGATTCGAGACCTGAAAATACAAGCACAGATAGTGAGTCACCGCCGCCGCCGCCGCCGCAGCCGCTGGCGAGTGTTCCAACGGTGGCGGCTACAGATGGGAAGAAGAAAAGAGGAAGGCCGAGAAAGTACGGTCCCAATGGGACTGTAGCTCCAACTTTGTCGCCAATGCCGATTTCGTCTTCTATTCCGCTGAGTGGAGAATTTCCGGTTTGGAAACGGGGAAGAGGGCGGTCAGTAGAGTCGATTAAGAAGCCGCGACGAGGGTACGAATTTGAGATTCCAGGTAACAAGGTTGCCTTCATTGCTGGAGCAGATTTCACACCTCACTCAACATCTTCTGGGGGCACGCTAACGTATGAGGGTCGATTTGAGATACTTTCGTTGTCTGGATCATATATGCCTTCTGAGAGCAGTGGAACAAAGAGCCGATCTCGAGGGGTGAGTGTTTCTTTGGCTGGCTCAGATGGCCGAGTGATGGGTGGAGAACTTGCCGGCATGCTGATAGCAGCTGGTCCAGTACAGGTGGTGGTGGGCAGTTTCCTACCCCCAGTTCACCAGAAGGAACATAAACCAAAGAAGAGTAGGATGGAACCTAAATCGAATGCAATTTTACCTCCAGCCGATGTTCTTTCTGGCGAAGGGACGAACGGAGTCCTTGGCGGAGTGGAGGCCATAGTCCCATCTACTCTAATTGAAGATAAACCAACCTCTTTAGACCAAAATCCAGCTTCTAAAACTCCACAAGTCAACGAAAAGTTACCATTTCCACAAGAATCAAGAGGTGTACTCAACCATTCAAACCATGAGGTTTCTTGTTGA 951 48.79 VSLCCFAFEPIFFLSVTVKMEEKEGVDFGFAVEVSQAPESLGMMDSRPENTSTDSESPPPPPPQPLASVPTVAATDGKKKRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFPVWKRGRGRSVESIKKPRRGYEFEIPGNKVAFIAGADFTPHSTSSGGTLTYEGRFEILSLSGSYMPSESSGTKSRSRGVSVSLAGSDGRVMGGELAGMLIAAGPVQVVVGSFLPPVHQKEHKPKKSRMEPKSNAILPPADVLSGEGTNGVLGGVEAIVPSTLIEDKPTSLDQNPASKTPQVNEKLPFPQESRGVLNHSNHEVSC 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9673141 9678184 + Carg20835-RA Car15g01247 163084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g01247 316 Pfam Plants and Prokaryotes Conserved (PCC) domain 157 224 IPR005175 -
Car15g01247 316 MobiDBLite consensus disorder prediction 229 253 - -
Car15g01247 316 MobiDBLite consensus disorder prediction 39 102 - -
Car15g01247 316 MobiDBLite consensus disorder prediction 275 316 - -
Car15g01247 316 MobiDBLite consensus disorder prediction 277 297 - -
Car15g01247 316 MobiDBLite consensus disorder prediction 54 68 - -
Car15g01247 316 ProSiteProfiles PPC domain profile profile. 105 245 IPR005175 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car15g01247 Car18g01102 CCT
Car15g01247 Car18g01102 ECH
Car02g00752 Car15g01247 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g01247 Car-Chr15:9673141 Car18g01102 Car-Chr18:11045895 4.04E-64 dispersed
Car15g01247 Car-Chr15:9673141 Car02g00752 Car-Chr2:5508278 4.15E-128 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g01247 - - csv:101211908 419.468