Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g01249 ATGCCGACAGAAAAAGAACAAAAGGAAAGTGGTTATGAAAATGAGCACATTTTGGGTCTTCATCAACTTAATGATCCAGGAATTTATCCAGAGAAAATTAGGAAGCTCGAACAACTCGACTTTGGCGATCCATTGACTACGAAAGAAGATATTGAGCAGCAGCTGAAGTTGGTTGGGAAGGATCAAGCCAGTCGCATGGTGAAGCACCATTCAGGTCCAAGTTTTGGTAGTAGTGCTGGAAATGTTGATCTGGACTCTGCCATAAGTAATGATTCATCTACAAGCACATATAGGATGTCATCCTGGAAAAAGCTACCATCAGCAGTTGCTAAGAACCGGAAAGACACTGACACTACTGAAACACCTTCTAAGGATAAACTTGAAACGTTGCATGTACATGAAGCTAAGACTGGGAGCATCAATCAATTAGATACCCCATCTATTCCTATTGCGCATTCTGAAGCACCTCCTAAAGAACAAAAACTATCTTGGGGAATATGGGGTTATCAAAATGCTACTTTTGAGAATCTGATGATATGTCGGATTTGTGAGGTTGAAATTCCTACCATTCATGTTGAGGAGCATTCTCGAATATGTACGATTGCCGATAGGTGTGATTTGAAAGGTTTAACTGTGAACGAGCGCCTTGCACGGGTTGCTACAGCTCTTGAAAAAATACTAGAGTCTTGGACACCTAAAAGTACACCGAGAAGTAGCAATGTTTCCTGTGGAAATTTCGATACTGTTAAGGTTTCTACATCAAGTATGCAAGAAGATTTTTTTGAGTTATCATCTAAAGGAATCAATTTGTCTTGTCAAAACTCAGAAGATTTGCTTGATTCCCTCCCTGTTACTGGCAACTCTTTTTGTATGGAAAGTCAGGATACCTTTCCTGATCCATCATACAATCGACCATTTAATTTCACACCAGAACACAGTACAAAATCACTGTCAGCTGGAACTCTAACACCAAGATCACCTCTTTTAACACCCAGATCCAGCCAGATTGAGTTGGCGTTGCATGGGCGAAGAACAATATCTGAACTTGAAAATTATCAGCAGATTTACAAATTATTGGATATTGTTCGTTCCATTGCAAATGTTAACAACTCTGGCTATGGTGCATTGGAGTCTATGCTTGATCGGTTAGAAGACCTTAAATATGCAATCCAGGATAGGAAGGTGGATGCTCTTGTCGTGGAGACTTTTGGAAGGCGCATAGAGAAGCTCTTGCAGGAAAAATATGTACAACTTTGTGGGCAAATAGAAGATGATAAAGTAGACTCTTCAAATGGAATCGTCGATGAAGAGAGTTCAGTGGAAGATGATGCTGTTCGTAGTTTACGTGCAAGTCCTGTTAACACATGTTCAAAAGATCGAACATCGATTGAAGATTTTGAAATAATTAAACCAATTAGTAGAGGTGCATATGGTCGAGTTTTCCTTGCCAGAAAACGAGCAACTGGAGACTTGTTTGCAATAAAGGTTTTAAAGAAGGCTGATATGATTCGCAAGAATGCAGTTGAAAGTATTTTGGCTGAACGTAATATCCTCATCTCAGTTCGCAACCCTTTTGTGGTCCGCTTTTTCTACTCTTTCACATGTAGGGAAAATTTGTATCTGGTCATGGAATACTTAAATGGTGGCGATATTTATTCCTTACTGAGAAACCTAGGGTGCTTAGATGAAGATATGGCTCGAATTTATATCGCTGAAATTGTTCTTGCTTTGGAATATTTGCACTCCTTAAATGTGATTCACAGAGACTTAAAGCCAGATAACTTATTGATTGGTCAAGATGGTCACATTAAGTTAACAGATTTTGGGCTCTCCAAGATTGGTCTTATCAATAGTACAGATGATTTCACAGGTCCATCAATCAATGGAACTGCTTCACTTGGAGACAATGGTCCAACATCTCAATCTTTGTCAAAAAGAGAACACAGACAAAAGCATTCAGTAGTTGGTACTCCAGACTATTTGGCGCCTGAGATACTTCTAGGCATGGGACATGGTGTAACTGCTGATTGGTGGTCTGTTGGCGTAATCCTTTTCGAGATGCTTGTAGGATTACCGCCGTTCAATGCAGAAAGTCCACAGCAAATTTTTGATAATATCATTAATAGAGACATACCATGGCCCAAGATACCAGACGAGATGAGTTATGAAGCCCATGATTTGATTGACAAATTGCTGACTGAAAATTCTGTTCAAAGACTGGGAGCTACTGGAGCCGGAGAGGTGAAGCAGCATCTTTTCTTTAAAGATATTAACTGGGATACACTTGCAAGGCAGAAGGCCATGTTTATACCATCAGCAGAGCCACAGGATACAAGTTATTTCATGAGCCGTTATGTATGGAATCCAGAAGATGAGGATTTTAACTGTGGAAGTGACTTTGATGATCATGATTTGTCAGATACTTGCAGCAGTAGTTCACTTAGTAACCAACAAGATGAAGATGGAGACGAATGTGGCAGTTTGGCTGACTTCGGTTCATCATCAGCCCTTTCTGTGAAGTATTCGTTCAGCAATTTCTCTTTCAAG 2547 39.93 MPTEKEQKESGYENEHILGLHQLNDPGIYPEKIRKLEQLDFGDPLTTKEDIEQQLKLVGKDQASRMVKHHSGPSFGSSAGNVDLDSAISNDSSTSTYRMSSWKKLPSAVAKNRKDTDTTETPSKDKLETLHVHEAKTGSINQLDTPSIPIAHSEAPPKEQKLSWGIWGYQNATFENLMICRICEVEIPTIHVEEHSRICTIADRCDLKGLTVNERLARVATALEKILESWTPKSTPRSSNVSCGNFDTVKVSTSSMQEDFFELSSKGINLSCQNSEDLLDSLPVTGNSFCMESQDTFPDPSYNRPFNFTPEHSTKSLSAGTLTPRSPLLTPRSSQIELALHGRRTISELENYQQIYKLLDIVRSIANVNNSGYGALESMLDRLEDLKYAIQDRKVDALVVETFGRRIEKLLQEKYVQLCGQIEDDKVDSSNGIVDEESSVEDDAVRSLRASPVNTCSKDRTSIEDFEIIKPISRGAYGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDIYSLLRNLGCLDEDMARIYIAEIVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKIGLINSTDDFTGPSINGTASLGDNGPTSQSLSKREHRQKHSVVGTPDYLAPEILLGMGHGVTADWWSVGVILFEMLVGLPPFNAESPQQIFDNIINRDIPWPKIPDEMSYEAHDLIDKLLTENSVQRLGATGAGEVKQHLFFKDINWDTLARQKAMFIPSAEPQDTSYFMSRYVWNPEDEDFNCGSDFDDHDLSDTCSSSSLSNQQDEDGDECGSLADFGSSSALSVKYSFSNFSFK 849
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9748482 9756364 + Carg20793-RA Car15g01249 163086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g01249 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 585 597 IPR008271 GO:0004672|GO:0006468
Car15g01249 849 ProSiteProfiles Protein kinase domain profile. 466 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g01249 849 MobiDBLite consensus disorder prediction 627 649 - -
Car15g01249 849 Pfam Protein kinase domain 466 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g01249 849 MobiDBLite consensus disorder prediction 627 641 - -
Car15g01249 849 ProSiteProfiles AGC-kinase C-terminal domain profile. 755 849 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00760 Car15g01249 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00680 Car-Chr1:4039881 Car15g01249 Car-Chr15:9748482 0 dispersed
Car10g00152 Car-Chr10:717498 Car15g01249 Car-Chr15:9748482 8.09E-63 dispersed
Car11g00123 Car-Chr11:688792 Car15g01249 Car-Chr15:9748482 9.69E-70 dispersed
Car15g01249 Car-Chr15:9748482 Car08g00953 Car-Chr8:6369726 2.86E-87 dispersed
Car15g01249 Car-Chr15:9748482 Car02g00760 Car-Chr2:5550539 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89414 PF00069 Pkinase 9.60E-63 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g01249 - - csv:101210442 1433.7