Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g01283 ATGAGGACTGGAAACCGGAAGAGGAAGCTGCGGCTAAGCAAGATCTACTCATTTGCTTGTGGAAAATCATCATTGAAAGATGAAGATCATTCACAAATTGGGATGCCCGGGTTCTCCCGGGTGGTTTTCTGTAATGATCCGGATTGTTTGGAGGCTGGAATGCGTAATTATGTTAACAACTCCATCAGCTCTACAAAGTATACACCCATCACTTTTTTGCCCAAGTCCCTGTTTGAGCAGTTCAGGAGGGTGGCTAATTTTTACTTCTTGATTGCTGGAATATTAGCCTTCACCCCTCTTGCTCCTTATACTGCTGTCAGTGCAATTATCCCTCTTATTGCAGTCATTATTGCGACAATGGTTAAGGAAGGTATTGAAGATTGGCGACGAAAGGCACAGGATATTGAGGTCAATAATAGAAAGGTTAAGGTTCATCAAGGCAATGGAGTCTTTGATTATACTGAATGGAAATCTTTGCGGGTCGGAGATATAGTGAAGGTTGAAAAGGATCAATACTTTCCAGCAGACCTTCTGTTGATTTCATCCTGCTATGAGGATGGATTCTGTTATGTAGAAACGATGAACCTTGATGGGGAAACAAATCTAAAGGTAAAGCAAGCCTTGGATGCAACTGCATTTGCAAATGAGGATTCTAACTTCCGTGACTTTAAGGCTACAATCAAATGTGAAGACCCAAATGCAAATCTCTATACCTTTGTTGGGAGCATGGACTTTGAAGAGCAACAATATCCACTTTCTCCCCAAAATCTTCTCCTGAGAGACTCCAAACTCCGAAACACAGAATATATATATGGGGCTGTTGTCTTTACTGGTCATGACTCAAAGGTTATTCAAAATTCTACTGATCCGCCTTCAAAAAGAAGCAAAGTTGAGAAGAAGATGGATAAAATCATATATCTGTTATTAGGCATTCTATTTGTGCTGGCATTTCTTGGATCTATAGTCTTTGGCGTCATGACTAAGGATGATCTGAAAAATGGGAGGTCAAAGAGATGGTATCTTCGACCAGATGACTCTACTATTTACTTTGATCCCAAAAATGCACCAGCTGCTGCAATTTTTCACTTTCTGACGGCACTGATGTTGTATAACTACTTTATCCCTATATCCTTGTATGTGTCTATTGAAATTGTCAAAGTTCTTCAGAGTATCTTCATCAATCAAGACATTCACATGTACTATGAAGAAGGTGACAAACCAGCACATGCCCGCACCTCCAATTTGAATGAGGAACTTGGTCAAGTTGACACCATACTCTCTGACAAGACTGGCACTTTGACCTGCAACTCAATGGAGTTTATCAAGTGTTCTGTGGCTGGAACTGCTTATGGCAGTGGCGTCACTGAAACTGAGAGAGCTATGGAAGGCAGAAATGGTATGCCAGTGCTTAATGGCAATGGCAATGGAAATGTCTATAAGCACAATGAGAATGCTACAGATACAAATCCCCCTGTCAAAGGCTTTAATTTTAAGGACAGAAGGATTATGAACGGAAACTGGGTTAAGGAACCTCATGCAGATGTCATCCAGAAGTTCTTCCGCCTCCTTGCAACTTGTCATACAGCTATTCCCGATGTCGATGAAAACACGGGAAAGATTTCATATGAAGCTGAATCACCAGATGAAGCAGCATTTGTAATTGCTGCCAGAGAAGTTGGTTTTGAATTCTACCAGAGGACACAGACAAGTATATCAGTTCGTGAATTGGATCCTAGGTCTGGAAGTAAGGTCGAAAGGACATACAAGCTTTTAAATGTTTTGGAGTTTAATAGCGCCCGGAAGAGAATGTCTGTCATAATAAGAGATGAAGATGGAAAAGTACTATTGCTATGCAAAGGTGCTGACAGTGTCATGTTTGAGAGGCTTGCCAAGAATGCTAGCAGATTTGAAGAGAAAACGAAGGAGCATATCAATGAGTATGCTGATGCAGGCTTACGGACATTGGTACTTGCTTATCGAGAACTTGACGAGGAGGAATACAAGGAATTTGATAGGAAATTCTATGAAGCAAAGAATTCAGTTAGTGCAGAGAGGGAGTCATTGATTGATAAAGTAACTGATCGCATTGAAAGGGATTTAATTCTTCTTGGTTCCACAGCAGTTGAGGACAAGCTTCAAAATGGGGTCCCTGAATGCATAGACAAACTTGCTCAAGCTGGGATTAAGATCTGGGTTTTGACTGGCGACAAGATGGAGACTGCGATCAATATTGGTTTTGCATGTAGTTTGCTTCGTCAAGGGATGAAACAGATTATTATAACTCTGGAAACACCAGAAATTCAAGCCTTAGAAAGGACGGGAGAGAAGGATATGATCACTAAGGCATCAAAAGAAAGCATCGTGCACAAGATCACTCGGGCAAGGTCTCAGCTCACTGCCTCAAGTGGAAGTTCTGAGGCTTATGCATTGATAATTGATGGGAAATCACTTACTTATGCTCTAGAGGATGATGTGAAAAATGCATTCCTTGAGCTTGCCATTGGATGTGCGTCTGTTATTTGCTGTCGCTCATCTCCAAAGCAAAAGGCAATGGTCACCAAGTTGGTTAAACTTGCAACGGGAAAAACAACATTAGCAATTGGTGATGGTGCAAATGATGTTGGAATGCTTCAAGAAGCAGATATTGGTATTGGAATCAGTGGTGCCGAAGGAATGCAGGCAGTCATGTCGAGTGATATAGCAATCGCTCAGTTCAGATATTTGGAGCGTCTACTACTCGTTCATGGACATTGGTGTTACAGGAGACTATCATCAATGATATGCTACTTTTTTTACAAGAATTTCACATTTGGTTTTACGATTTTCTTATATGAGGCATACACTTCGTTCTCTGCACAACCTGCATATAACGACTGGTTTATGTCTCTCTACAATGTCGTGTTCTCCGCTCTGCCCGTTGTGGCTCTCGGGGTGTTTGACCAAGACGTATCGGCAAGATACTGCCTTAAGTTTCCTATGTTGTACCAACAAGGTGTGCAGAATGTTCTCTTCAGCTGGCTTCGGATAATCGGCTGGATGTTTAACGGTCTGTGCAGTGCGTTGATCATTTTCTTTTTCTGCACAAGTGGAATGCAGCATCAAGCATTTAACCCCGAGGGTAAGACCGTAGGGAGGGATATTCTCGGGGCGACGATGCTGTCGTGTGTTGTTTGGGTTGTCAACTTGCAGATGGCACTCTCTGTTAGCTACTTCACAATGTTACAAGTTATTTTCATCTGGGCTTCAATCTTTATCTGGTACCTTTTTCTGATGATATATGGAGCCTTCCCTGCCAGCATTTCGACTAATGCATATCGCGTGTTCCTCGAAGCTCTTGCTCCTGCCGGGTCTTATTGGGTTCTGCTGATATTTGTGGTGATCTCTACTCTCATTCCATTCTTTGTATACTCAGCATTGCAGATGAATTTCTTCCCCATGTACCATGAAAAAATACAGTGGATAAGGCACGATGGTCAGGGTCAGATAGACGATCCCGAGTTTGTCAATATGGTCAGGCAAAGCTCGATAAGACCGAGTACTGTCGGCTTCACTGCTCGTTTGGCAGCCAAAATAAGAAGAGAAAAACCATAG 3591 42.08 MRTGNRKRKLRLSKIYSFACGKSSLKDEDHSQIGMPGFSRVVFCNDPDCLEAGMRNYVNNSISSTKYTPITFLPKSLFEQFRRVANFYFLIAGILAFTPLAPYTAVSAIIPLIAVIIATMVKEGIEDWRRKAQDIEVNNRKVKVHQGNGVFDYTEWKSLRVGDIVKVEKDQYFPADLLLISSCYEDGFCYVETMNLDGETNLKVKQALDATAFANEDSNFRDFKATIKCEDPNANLYTFVGSMDFEEQQYPLSPQNLLLRDSKLRNTEYIYGAVVFTGHDSKVIQNSTDPPSKRSKVEKKMDKIIYLLLGILFVLAFLGSIVFGVMTKDDLKNGRSKRWYLRPDDSTIYFDPKNAPAAAIFHFLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEGDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGSGVTETERAMEGRNGMPVLNGNGNGNVYKHNENATDTNPPVKGFNFKDRRIMNGNWVKEPHADVIQKFFRLLATCHTAIPDVDENTGKISYEAESPDEAAFVIAAREVGFEFYQRTQTSISVRELDPRSGSKVERTYKLLNVLEFNSARKRMSVIIRDEDGKVLLLCKGADSVMFERLAKNASRFEEKTKEHINEYADAGLRTLVLAYRELDEEEYKEFDRKFYEAKNSVSAERESLIDKVTDRIERDLILLGSTAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIITLETPEIQALERTGEKDMITKASKESIVHKITRARSQLTASSGSSEAYALIIDGKSLTYALEDDVKNAFLELAIGCASVICCRSSPKQKAMVTKLVKLATGKTTLAIGDGANDVGMLQEADIGIGISGAEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRLSSMICYFFYKNFTFGFTIFLYEAYTSFSAQPAYNDWFMSLYNVVFSALPVVALGVFDQDVSARYCLKFPMLYQQGVQNVLFSWLRIIGWMFNGLCSALIIFFFCTSGMQHQAFNPEGKTVGRDILGATMLSCVVWVVNLQMALSVSYFTMLQVIFIWASIFIWYLFLMIYGAFPASISTNAYRVFLEALAPAGSYWVLLIFVVISTLIPFFVYSALQMNFFPMYHEKIQWIRHDGQGQIDDPEFVNMVRQSSIRPSTVGFTARLAAKIRREKP 1196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 10038789 10045030 + Carg20758-RA Car15g01283 163120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g01283 1196 Pfam Phospholipid-translocating ATPase N-terminal 42 108 IPR032631 -
Car15g01283 1196 Pfam Cation transport ATPase (P-type) 539 629 - -
Car15g01283 1196 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Car15g01283 1196 Pfam Phospholipid-translocating P-type ATPase C-terminal 895 1145 IPR032630 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car15g01283 Car18g00984 CCT
Car04g01603 Car15g01283 CCT
Car04g01603 Car15g01283 ECH
Car15g01283 Car18g00984 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00882 Car-Chr13:9281521 Car15g01283 Car-Chr15:10038789 0 dispersed
Car15g01283 Car-Chr15:10038789 Car18g00024 Car-Chr18:114729 0 dispersed
Car15g01283 Car-Chr15:10038789 Car18g00984 Car-Chr18:10348396 0 wgd
Car15g01283 Car-Chr15:10038789 Car04g01603 Car-Chr4:9266211 0 wgd
Car15g01283 Car-Chr15:10038789 Car04g00910 Car-Chr4:5185579 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g01283 K01530 - csv:101205800 2264.96