Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g01289 ATGATTGTTCTTCATCACTTCAATCCCTCCACAATTGAATCCTTCCATTTTTTCAACCCCCCTTTTTGCTTACCATCAATCATGAACCTCAATGTTTTTGTGTTCTGGATCATACAGATCTCCATCCATGCCGTTCCAGTTGTTTCTGAAACCAAAGCGTCCCACGTTTCTGCATTGAATGTGATGTTTAGCAGTTTAAATTCACCTTCACAACTCTCTCGTTGGAAGTCAAGTGGGGGTGACCCATGTGGGGATTCTTGGGAAGGGATCAAATGCTCAGGATCATCCATCACTGAAATAACTTTATCAAACTTTGAACTGAGTGGAACATTAGGCTACCAGCTTTCAAATTTGGCTTCTGTCACCTCCTTTGATTTGAGCAATAACAACCTGAATGGCGATATCCCTTATCAGCTTCCCCCTAATGCAGTTTCCATCGATCTTTCCACAAACAGCTTCACCGGAAGCGTGCCGTATTCAATATCTCAGATGTCTAATCTTCAAGTTTTAAATCTTGGGCATAATCAGCTGAGCAACCAATTGAGTGACATGTTTGGCAACGTTTCTAAACTCAACAGGATGGATCTCTCATTCAACTCGATTTCAGGAGACTTACCTCTAAGTTTTAAGAATCTTTCAAGCCTTACTGTATTGCATATACAAAATAATGGATTTACAGGTTCTATTAATGTTCTTGCTGATCTTCCACTCAAAGATTTGAGAGTCACAAATAACAAGTTCACTGGATGGATTCCTGATAGCCTTCAGGACATAGATAATTTGGAAACTGGAGGCAATTCATGGTCATCTGGACCAGCTCCTCCTCCACCACCAGGAGATATGGCAAAGAAAAACAAGAACAAAAACGGGTCAAGCAACTCATCCCCAAAAGTAAGTGGAATGGCGATAGCAGGAATAGTGATGGGAGTATTAGCAGTAATCGCCATAATCATAGCATTGTTCTCAAGAAGGTTACCTCCTTCCCACTTTCTTGATGAAGACACAAACCAACACAGCGGATCCTTAACTCCACGCACACCCCATCAACCGTCCAAAGATTTGCACAATAACACTAACAATAATAATGCAATTGAAAGAAAATCATGCACCTCAGATGTCTCTGTTGACATAAAGCCTCTCAGTGGGCTTAGGCCTCCTCCACCTTTTGATGCTGTCAAGCCCTCCGGTGACACTCAGCTTGCAAGCCGCCTCAGTTCCAGGAGGAGCACTTCCGTGCGTGTCATTTCCTACTCATTGCCTGATTTGCAGACTGCTACTGCTAACTTCGCTACTGGTCGCCTTCTTGGTGAGGGCTCAATTGGACGTGTTTACAAGGCCAAGTATGGAGATGGGAAGGTGTTGGCAGTGAAGAAGATTGATTCATCAGTTTTTCAAGGAAGAACAGAGGAGTTTTCTGCAGTAGTTGCTGTCATTTCAAAGCTTCATCACACCAACATTACAGAAGTTGTTGGGTTCTGTTCAGAGCAGGGACAGCACATGTTGGTTTATGAATATTTCATGAATGGCTCACTTTATGAGTTTCTTCACATGTCGGATGACTTCAGTAAGCCACTCACATGGAACACTAGAGTCAAAATTGCTTTGGGGACTGCAAAAGCTCTTCAGTACCTTCACGAGGTTTGCTCGCCATCCATAATTCACATGAATATCAAGTCCTCTAATATATTGCTCGACACGGAACTCAATCCCCGTCTCTCGGACTACGGTTTAGCAGCATTTTACAAGCTAAGAAGTGGAAGGCCTGGAGGTGGATATGATGCACCAGAATGCACACAGGGTTCAAGTTACACAATGAAGAGTGACATTTACAGTTTGGGAGTGGTGATGTTGGAGCTGTTGACCGGGCGGATGCCTTATGACTCTGGGAAGGCAAAGATGGAGCAATGTCTAGTCCGATGGGCAACCCCACAGCTGCATGACATAGATGCATTGGACAAAATGGTAGACCCTGCATTGCGTGGGCTGTATCCGCCGAAGTCCGTGTCTAGATTTGCAGATATCATCGCCCTTTGCGTGCAATCGGAGCCTGAATTTCGGCCTCCCATGTCGGAGGTGGTGCAAGCCTTGGTGACTCTGGTTCAACGATCAGCATGA 2115 44.35 MIVLHHFNPSTIESFHFFNPPFCLPSIMNLNVFVFWIIQISIHAVPVVSETKASHVSALNVMFSSLNSPSQLSRWKSSGGDPCGDSWEGIKCSGSSITEITLSNFELSGTLGYQLSNLASVTSFDLSNNNLNGDIPYQLPPNAVSIDLSTNSFTGSVPYSISQMSNLQVLNLGHNQLSNQLSDMFGNVSKLNRMDLSFNSISGDLPLSFKNLSSLTVLHIQNNGFTGSINVLADLPLKDLRVTNNKFTGWIPDSLQDIDNLETGGNSWSSGPAPPPPPGDMAKKNKNKNGSSNSSPKVSGMAIAGIVMGVLAVIAIIIALFSRRLPPSHFLDEDTNQHSGSLTPRTPHQPSKDLHNNTNNNNAIERKSCTSDVSVDIKPLSGLRPPPPFDAVKPSGDTQLASRLSSRRSTSVRVISYSLPDLQTATANFATGRLLGEGSIGRVYKAKYGDGKVLAVKKIDSSVFQGRTEEFSAVVAVISKLHHTNITEVVGFCSEQGQHMLVYEYFMNGSLYEFLHMSDDFSKPLTWNTRVKIALGTAKALQYLHEVCSPSIIHMNIKSSNILLDTELNPRLSDYGLAAFYKLRSGRPGGGYDAPECTQGSSYTMKSDIYSLGVVMLELLTGRMPYDSGKAKMEQCLVRWATPQLHDIDALDKMVDPALRGLYPPKSVSRFADIIALCVQSEPEFRPPMSEVVQALVTLVQRSA 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 10058747 10064385 - Carg20752-RA Car15g01289 163126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g01289 704 Pfam Leucine rich repeat N-terminal domain 56 93 IPR013210 -
Car15g01289 704 MobiDBLite consensus disorder prediction 332 403 - -
Car15g01289 704 ProSiteProfiles Protein kinase domain profile. 429 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g01289 704 Pfam Protein kinase domain 431 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g01289 704 MobiDBLite consensus disorder prediction 332 369 - -
Car15g01289 704 MobiDBLite consensus disorder prediction 261 296 - -
Car15g01289 704 Pfam Leucine rich repeat 142 201 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00721 Car-Chr8:4628073 Car15g01289 Car-Chr15:10058747 0 dispersed
Car15g01289 Car-Chr15:10058747 Car17g00608 Car-Chr17:5738112 0 dispersed
Car15g01289 Car-Chr15:10058747 Car04g00906 Car-Chr4:5174426 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89416 PF00069 Pkinase 2.40E-41 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g01289 - - cmax:111468899 1295.03