Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00037 ATGGCTTTGCTGAGTCCTCGATTGCATAGATTCCGCCTAACCAAGCTCCACTATGCCTCCGCCTCCATACCCACAAAGACAAACCAGCTCACTCTCAGAAGAAAAAGCCGTTGCTGCTCCTCCATAGCTATCGATGCTCCATCTTCTTTAACAGATGCTGCGGGAATCAGATGGGGCTCGACGACTCTGCAAGGATTGCGCGAAGAAATGGAGGACGACGTTGTTGTGCGGTCTGATGGTCTTAGTGGCTTCTTGTTTGCTGCAGTGTTCGATGGCCATGGTGGCTATTCCTCCGTTAAGTTCCTCAGAGAGGAGCTGTACAAAGACTGCGTAGCAGCTTTACAAGGTGGCCTGCTGTTGAATGGAGGGGATTTTGAAGTGATAAAAGCAGCTTTGGCGAAGGCTTTTGATGAGACTGATAAAAAGTTACTCCTTTTGCTTGAAGCAGATGGGGAGGAAGATGAGTCTGGTTCCACGGCAACTGTTGCGTTCATACGAAACGATGTGTTGTTCGTTTCTCATGTTGGCGACTCTTGTGTTGTATTATCTCGTCCTGGAGGAGCACAGTTGTTGACTAGTTCTCATCGGCCTTATGGAAACAACACCACCTCACTGCAAGAAGTTAAAAGAATTAGAGAAGCAGGTGGATGGGTGTGTGTTTCTCTTGAAATTGGCTGCATGTTTCACTTTACTCTGATTCTCTTGTTCCATATAAAACTTAATCATAAGATGATTGTTAACGGAAGAATCTGTGGGGATATCTCTGTATCGCGTGCATTTGGCGACATACGGTTCAAGACGAAGAAAAACGAGATGCTACAAAAAGGAGTTGAAGAAGGGAGATGGTCTGAAAAGTTTGTTTCTCGTGTACGTTTCAATGGAGACTTGGTTACTGCATCACCGGAAATTTTCCAAACTACACTCGGATCAAATGTCGAATTTATGTTGATAGCAACAGATGGCCTATGGGATTACATGAATAGATCGGATGCGGTTAAGTTCGTTCGAAATGAACTTAGACAGCATGGTGATGTTCAGCTAGCTTGTGAAGCCCTCGCGCAAGCAGCCTTGGATAAAGGGTCACAAGACAATATTAGCATTATCATGGCTGATTTCGGGCGGACGGATTGGCAGAACTTTCAGATGAAGCAAGAGAACGTCATATTTGAAGTGGCTCAAGCTTTTGCTACGATCGGGGTCGTTTCTCTCGGTATTTGGTGGGCGTCCTCGACTTTCTCTCTTTAA 1245 45.54 MALLSPRLHRFRLTKLHYASASIPTKTNQLTLRRKSRCCSSIAIDAPSSLTDAAGIRWGSTTLQGLREEMEDDVVVRSDGLSGFLFAAVFDGHGGYSSVKFLREELYKDCVAALQGGLLLNGGDFEVIKAALAKAFDETDKKLLLLLEADGEEDESGSTATVAFIRNDVLFVSHVGDSCVVLSRPGGAQLLTSSHRPYGNNTTSLQEVKRIREAGGWVCVSLEIGCMFHFTLILLFHIKLNHKMIVNGRICGDISVSRAFGDIRFKTKKNEMLQKGVEEGRWSEKFVSRVRFNGDLVTASPEIFQTTLGSNVEFMLIATDGLWDYMNRSDAVKFVRNELRQHGDVQLACEALAQAALDKGSQDNISIIMADFGRTDWQNFQMKQENVIFEVAQAFATIGVVSLGIWWASSTFSL 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 273292 276426 - Carg15056-RA Car16g00037 163189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00037 414 ProSiteProfiles PPM-type phosphatase domain profile. 57 372 IPR001932 -
Car16g00037 414 Pfam Protein phosphatase 2C 244 365 IPR001932 -
Car16g00037 414 Pfam Protein phosphatase 2C 59 219 IPR001932 -
Car16g00037 414 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car16g00037 Car18g01234 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00037 Car-Chr16:273292 Car01g01296 Car-Chr1:11667146 3.86E-31 dispersed
Car16g00037 Car-Chr16:273292 Car18g01234 Car-Chr18:11831260 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00037 K04457 - csv:101218076 649.432