Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car16g00058 | ATGATGGTCGATACGGGTGCATCGGAAAATCGTGCGCCGGTTGTTGATAAGCATCCGGAGAAAGATGAAGATGGTGGTTATGCCAGTGGAGGGTGGAAAAGTGAAGATGGGAAACTTAGTTGGGGGTATTCGAGTCTCCGAGGAAAGAGGGCGACCATGGAAGATTTCTTTGATATTAAAATGTCAAAGGTTGATGGTCAAATAGTCTGCCTTTTTGGCATCTTTGATGGTCATGGTGGATACCGTGCTGCAGAGTTTTTGAAGGACCATCTCTTCGAGAATCTGATAAAGCACCCAAAATTTTTGATAGATACCAAATTAGCTATCAGAGAAACGTATCGACAGACGGATGCTGAATTTTTAAATTCCGAAAAGGATACTTTAAGGGACGATGGCTCTACTGCTTCAACAGCTTTGTTAGTTGGCAATCATCTCTATGTTGCCAATGTTGGAGATTCGCGTACTATTATATCGAAGGGCGGTGAAGCCATCCCTCTTTCTGAGGACCATAAACCAAACAGAACTGACGAGCGGAGGCGAATTGAAAATGCCGGGGGTGTTGTCATGTGGGCTGGCACTTGGAGGGTAGGAGGAGTGTTAGCGATGTCCCGTGCTTTCGGTAACAAGATGTTGAAGCAGTTTGTTGTGGCGGATCCTGATATTCAGGATCTTGAAGTAGACAAGGACATCGAGCTGCTTGTTCTCGCAAGCGATGGACTTTGGGACGTGGTACGCAACGAGGATGCAGTACTAGTTGCGGGGAAAGAAGAGGGACCTGAGGCAGCTGCTCGGAAACTAACCGAAGCAGCGTTTACCCGTGGTAGCGCTGACAATATAACATGCATTGTGGTGAAGTTTCATCACGACAATGCAAGCACGGGTGTCGAAAACGACTAA | 897 | 46.71 | MMVDTGASENRAPVVDKHPEKDEDGGYASGGWKSEDGKLSWGYSSLRGKRATMEDFFDIKMSKVDGQIVCLFGIFDGHGGYRAAEFLKDHLFENLIKHPKFLIDTKLAIRETYRQTDAEFLNSEKDTLRDDGSTASTALLVGNHLYVANVGDSRTIISKGGEAIPLSEDHKPNRTDERRRIENAGGVVMWAGTWRVGGVLAMSRAFGNKMLKQFVVADPDIQDLEVDKDIELLVLASDGLWDVVRNEDAVLVAGKEEGPEAAARKLTEAAFTRGSADNITCIVVKFHHDNASTGVEND | 298 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 387816 | 391360 | + | Carg15077-RA | Car16g00058 | 163210 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car16g00058 | 298 | MobiDBLite | consensus disorder prediction | 11 | 29 | - | - | |
Car16g00058 | 298 | ProSiteProfiles | PPM-type phosphatase domain profile. | 40 | 286 | IPR001932 | - | |
Car16g00058 | 298 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Car16g00058 | 298 | ProSitePatterns | PPM-type phosphatase domain signature. | 71 | 79 | IPR000222 | GO:0043169 | |
Car16g00058 | 298 | Pfam | Protein phosphatase 2C | 45 | 279 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car15g00584 | Car-Chr15:3224526 | Car16g00058 | Car-Chr16:387816 | 4.32E-114 | dispersed | |
Car16g00058 | Car-Chr16:387816 | Car16g00219 | Car-Chr16:1235974 | 3.49E-58 | dispersed | |
Car16g00058 | Car-Chr16:387816 | Car18g01219 | Car-Chr18:11737181 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car16g00058 | K17506 | - | csv:101203681 | 566.614 |