Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00067 ATGGCCATCGCTGTGCTCGATGCCCTCGACAACGCTCGGACACAATGGTACCATATTACCGCCATAGTCATCGCCGGGATGGGCTTCTTCACCGACGCCTATGATCTTTTCTGCATCTCAACCGTGTCGAAGCTTCTCGGTCGACTTTACTACTTCGATCCAGATAGTTCGAAGCCGGGAAAACTTCCGAACGCAGTCAACAATGCTGTCGTTGGAGTTGCACTGGTTGGAACCCTGATGGGGCAACTTTTCTTCGGGTGGTTGGGTGACAAACTTGGGAGGAAGAAAGTCTATGGTGTTACTCTTATTCTTATGGCCTTTTGTGCCATTTGCTCAGGGTTGTCCTTTGGATCAACATCAAAATCAGTGATTGGTACCCTTTGCTTCTTTAGATTTTGGCTTGGATTTGGCATTGGTGGCGACTATCCCCTTTCAGCCACCATCATGTCCGAATATGCTAACAAGAAAACTCGAGGGGCTTTCATTGCAGCCGTCTTCGCCATGCAGGGTGTGGGGCTGATATTCGCAGGGCTTGTGTCAATGATTCTATCAAAAATCTTCGTGTCCCTTCACGAGGCTCCTTCCTACAAAAGCAACCATGTATTTTCCACACAGCCTCAAGGGGACTTCCTATGGCGGATTGTGTTAATGCTTGGTGCTTTGCCAGCCATCTTAACATACTATTGGCGAATGAAGATGCCTGAGACAGGGCGCTACACCGCCCTTATTGAAGGCAATGCCAAGCAAGCGGCTGCAGACATGGGGAAGGTGTTAGAGATCACAATTCAAGCCGAACAAGACAAGCTTTCTAATTTCAAATCCGCCAATGAATATGGATTGCTGTCTAAGGAGTTCTTTCACCGCCATGGGCTCCATTTGATAGGCACCACCACCACATGGTTCTTGTTGGACATTGCGTTTTATAGCAATAACCTTACACAAAAGGACATCTTCCCAGCAATGAATTTGACAAAGAAACCAGAAGAAGTTAGCGCATTGGAAGAGGTTTATGAAACATCAAAGGCTATGTTTCTTGTTGCATTACTTGGCACATTCCCTGGATATTGGTTCACTGTGTTCCTGATTGAGAAGCTTGGAAGGTTCAAAATTCAATTGATTGGATTCTTCATGATGTCCATTTTCATGGCCGTCCTCGGCATTCGCTACAATTATTTGAAGAATCATCCCGCCGAGTTCGCCCTCCTTTATGGCTTGACGTTCTTCTTTGCCAACTTTGGTCCCAATAGTACCACCTTTGTCCTACCGGCCGAGCTCTTCCCAACACGGGTTCGGTCGACGTGCCATGCGCTAAGTGCAGCGTCGGGGAAGGCCGGTGCCATCGTTGGAGCTTTCGGGGTGCAAAACTATACGTTAGATGGTAACCCTAGCAAGATTCAAAAGGCCATGATCTTCTTAGCCTTCACCAACATGCTAGGGTTTGTGTTTACATTCTTGGTGACCGAGACGAAAGGTCGATCATTAGAGGAGATCTCCGGCGAGGACGGGGGCGCCGGTGAGCCAGAAACTCAAATGCCAGTGAGATCAATGGGAAAGCCAGGAGCTCAAATGGAAGAAGAAAATTGA 1584 47.79 MAIAVLDALDNARTQWYHITAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPDSSKPGKLPNAVNNAVVGVALVGTLMGQLFFGWLGDKLGRKKVYGVTLILMAFCAICSGLSFGSTSKSVIGTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGVGLIFAGLVSMILSKIFVSLHEAPSYKSNHVFSTQPQGDFLWRIVLMLGALPAILTYYWRMKMPETGRYTALIEGNAKQAAADMGKVLEITIQAEQDKLSNFKSANEYGLLSKEFFHRHGLHLIGTTTTWFLLDIAFYSNNLTQKDIFPAMNLTKKPEEVSALEEVYETSKAMFLVALLGTFPGYWFTVFLIEKLGRFKIQLIGFFMMSIFMAVLGIRYNYLKNHPAEFALLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAASGKAGAIVGAFGVQNYTLDGNPSKIQKAMIFLAFTNMLGFVFTFLVTETKGRSLEEISGEDGGAGEPETQMPVRSMGKPGAQMEEEN 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 438023 439808 + Carg15086-RA Car16g00067 163219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00067 527 Pfam Sugar (and other) transporter 22 498 IPR005828 GO:0016021|GO:0022857|GO:0055085
Car16g00067 527 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 491 IPR020846 GO:0022857
Car16g00067 527 MobiDBLite consensus disorder prediction 495 527 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00067 Car-Chr16:438023 Car02g00092 Car-Chr2:589896 4.63E-10 dispersed
Car16g00067 Car-Chr16:438023 Car07g00218 Car-Chr7:1202309 5.34E-14 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00067 K08176 - csv:101210631 955.281