Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00103 ATGCCTTCATGGTGGGGGAAGTCGTCATCCAAAGAAGTGAAGAAGAAAGCGAGCAAGGAAAGTTTCATTGATTCATTACACCGTAAGTTTAAGAATCCACCTGAAGGAAAAGTGAACTGCAGATCAGGAAGTTCTCGTAGACGTGGTGGTGACACTATATCTGAGAAGGGGTCTAAATCACCTCTATCAAGATCACCATCACCTTCCAAAGAAGTATCTAGATGTCAAAGTTTTGCTGAAAGATCACGTTCTCACAAACTTCCACTTCCAGATTTGCACCGTGTGGGTATAAGTCGCACAGATTCTGGGATTGGTGTGACAGCAAAATCTAAATTAGAGAGAAGTTCCAAGACATCTTCATTCCTACCCCTCCCTAGACCTGCATGTATTCGAAGTAGGCCAGGTCCTGCAGATTTGGATGGAGATTTGGTCACTGGTTCAGTCTCTGGTGAGTCCTTGAGTGATAGTGATGATCCCAACGATTCGCGACAACGTAGTCCTCGGGCAACAGACTTTGACATTGGGGCTAGAACTGTGATAGCTTCTACTGAACCTAGTGCAACTGCCAAAGATCAGTCTCCTACTGTCGTGCAAATACATTTAAAAGAGGGAAAGAAAGCGGAAAATGTTCCATTTCCTCATAAAAGTGCTTCAATACCCAAACGGAGGCCTTTAAGCAGCAACGTAACAAATCTACAAGTTCCTCGCCATGGGGCCTTCTTTAGTGCTCCTGATAGTTCTATGTCTAGTCCCTCCAGAAGTCCTATGAGGGTATTTAGCACTGAGCAAGTCGTGAACGCTGCTGTTTGGGCTGGAAAATCTCACCCAGATGTCGTTTTAGGTGGATCTGGCCATTGTTCTAGTCCTGGTTCTGGTCACAATTCAGGGCACAACTCTATGGGAGGTGATTTGACGGGCCACTTCTTTTGGCAACAAAGTAGGGGTAGCCCTGAATATTCTCCAGTACCTAGTTCTAGAATGACTAGCCCCGGCCCTAGTTCCAGAATTCAAAGTGGTGCTGTCACGCCTATTCATCCTAGAGCAGGAGCTCTACCTGCTGAGTCACAAACATGCTGGCCTGATGAGAAACAAACTCATCGTTTGCCTCTTCCTCCCATAGCAATCTCAAACTCTTCACCGTTTTCGCATTCAAATTCTGCAGTCACATCTCCTACAGTTCCTAGGAGTCCAGGAAGGACAGAGAATCCAGCAAGCCCAGGTTCACGCTGGAAAAAGGGGAAGCTACTGGGTAGGGGAACATTTGGGCACGTATATGTTGGTTTTAATAGCGAAAGTGGAGAAATGTGTGCAATGAAGGAGGTCACGTTATTTTCTGACGATGCAAAGTCTAAGGAAAGTGCTAAACAATTAATGCAGGAAATTGCTCTACTGAGTCGTTTGCGGCATCCCAACATCGTGCAGTATTATGGATCGGAAACAGTGGGTGACAAATTCTATATATATCTGGAATATGTATCTGGTGGTTCCATTTATAAATTACTACAAGAATATGGACAATTTGGGGAACTAGCAATTCGTAGCTATACTCAACAACTGCTATCAGGACTTGCATATTTGCATGCTAAAACTACAGTGCACAGGGATATTAAAGGAGCAAACATACTTGTTGACCCAAATGGACGTGTTAAATTGGCAGACTTTGGGATGGCAAAGCATATCACAGGCCAATCGTGTCCACTATCATTGAAGGGCAGCCCTTACTGGATGGCACCTGAGGTCATAAAGAACTCAAATGGTTGCAACCTTGCTGTTGATATTTGGAGTCTTGGATGTACCGTTCTGGAGATGGCTACTACGAAGCCACCCTGGAGCCAGTATGAAGGGGTTGCTGCGATGTTTAAGATTGGTAATAGCAAAGAACTCCCGGTAATTCCAGAGCACCTCTCAGATGATGGGAAGGATTTTGTGAGACTGTGTCTGCAACGAAACCCGCTTCATCGACCTACAGCTGCTCAACTCTTGGAGCATCCCTTTGTCAAATATGCTGCGCCTGTAGAGAGGCCTATTTTGAGCTCTGAACCTTCTGATACAACTCCTGGGGTTACAAACGGAGTGAAGATTTTGGGTATTGGTCAATCACGGACTACTTCTGTGGACTCTGATAGTAGACTTGCAGTTCATTCTTCAAGAGTCTCAAAAGCTGTTCTTCATGCCAGTGAAATCAATATTCCCAGAAACATATCATGCCCTGTTTCGCCAATTGGAAGCCCTCTTTTGCACTCGCGATCACCTCATACCAGTGGAAGAATGTCTCCTTCACCCATATCAAGTCCACGAACCACTTCGGGCTCATCCACACCTTTGACAGGATGTGGTGGTACAATTCCTTACAACCACCTGAAACAAGCTATATACTTGCAAGATGGATTTGGAAGCAAGCCAAAGTCCTTAAATAGCACTCCGTACAGCAGCTGTATATCCTTCCATGATTCAAATCCCGATATTTTTCGAGGGTTGCAGCCTGGGGCTCACATATTCTCTGAAATGATACCAGAAAATGATATCTTGGGAAAGCAGGTCGGACGGCCTGCTTACGGTGAATTGTATGATGGACAGCAGGTCTTGGCTGACCGAGTGTCTCGACAGCTCCTGAGGGATCATGTTAAAACAAAACCCTCTCTTGATTTGAGTCCTACCCCCACAACGTCTAGCCGCATGAATGGTATCTGA 2691 45.34 MPSWWGKSSSKEVKKKASKESFIDSLHRKFKNPPEGKVNCRSGSSRRRGGDTISEKGSKSPLSRSPSPSKEVSRCQSFAERSRSHKLPLPDLHRVGISRTDSGIGVTAKSKLERSSKTSSFLPLPRPACIRSRPGPADLDGDLVTGSVSGESLSDSDDPNDSRQRSPRATDFDIGARTVIASTEPSATAKDQSPTVVQIHLKEGKKAENVPFPHKSASIPKRRPLSSNVTNLQVPRHGAFFSAPDSSMSSPSRSPMRVFSTEQVVNAAVWAGKSHPDVVLGGSGHCSSPGSGHNSGHNSMGGDLTGHFFWQQSRGSPEYSPVPSSRMTSPGPSSRIQSGAVTPIHPRAGALPAESQTCWPDEKQTHRLPLPPIAISNSSPFSHSNSAVTSPTVPRSPGRTENPASPGSRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLMQEIALLSRLRHPNIVQYYGSETVGDKFYIYLEYVSGGSIYKLLQEYGQFGELAIRSYTQQLLSGLAYLHAKTTVHRDIKGANILVDPNGRVKLADFGMAKHITGQSCPLSLKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPVIPEHLSDDGKDFVRLCLQRNPLHRPTAAQLLEHPFVKYAAPVERPILSSEPSDTTPGVTNGVKILGIGQSRTTSVDSDSRLAVHSSRVSKAVLHASEINIPRNISCPVSPIGSPLLHSRSPHTSGRMSPSPISSPRTTSGSSTPLTGCGGTIPYNHLKQAIYLQDGFGSKPKSLNSTPYSSCISFHDSNPDIFRGLQPGAHIFSEMIPENDILGKQVGRPAYGELYDGQQVLADRVSRQLLRDHVKTKPSLDLSPTPTTSSRMNGI 896
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 632279 637986 + Carg15125-RA Car16g00103 163255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00103 896 MobiDBLite consensus disorder prediction 371 403 - -
Car16g00103 896 MobiDBLite consensus disorder prediction 103 122 - -
Car16g00103 896 MobiDBLite consensus disorder prediction 363 412 - -
Car16g00103 896 MobiDBLite consensus disorder prediction 745 777 - -
Car16g00103 896 MobiDBLite consensus disorder prediction 285 340 - -
Car16g00103 896 MobiDBLite consensus disorder prediction 287 340 - -
Car16g00103 896 MobiDBLite consensus disorder prediction 876 896 - -
Car16g00103 896 MobiDBLite consensus disorder prediction 76 92 - -
Car16g00103 896 MobiDBLite consensus disorder prediction 16 54 - -
Car16g00103 896 MobiDBLite consensus disorder prediction 881 896 - -
Car16g00103 896 MobiDBLite consensus disorder prediction 56 75 - -
Car16g00103 896 MobiDBLite consensus disorder prediction 746 777 - -
Car16g00103 896 ProSiteProfiles Protein kinase domain profile. 410 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car16g00103 896 ProSitePatterns Protein kinases ATP-binding region signature. 416 439 IPR017441 GO:0005524
Car16g00103 896 MobiDBLite consensus disorder prediction 16 175 - -
Car16g00103 896 MobiDBLite consensus disorder prediction 156 170 - -
Car16g00103 896 Pfam Protein kinase domain 411 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car16g00103 Car18g01166 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00893 Car-Chr3:7090550 Car16g00103 Car-Chr16:632279 1.05E-113 dispersed
Car05g00172 Car-Chr5:890545 Car16g00103 Car-Chr16:632279 8.13E-110 dispersed
Car12g00485 Car-Chr12:3045166 Car16g00103 Car-Chr16:632279 8.14E-107 dispersed
Car16g00103 Car-Chr16:632279 Car18g01166 Car-Chr18:11408514 0 wgd
Car16g00103 Car-Chr16:632279 Car02g00816 Car-Chr2:5902584 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89420 PF00069 Pkinase 2.30E-69 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00103 K20717 - csv:101214961 1525.38