Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00126 ATGGCATCTTCTCGTCTGGCTGGAGGATTAGCTCAGTCTCCATCAAGTTCTGGGATTTTCTACCAAGGGGAAGGGCAGTCCCCAGCTATTGTTAATTCTCACTTGGGCCAATCATTTGCAAATTCATCAAATTCAATCCCAGGAACTGGATGTTCTGATTTTGGTCCAGTTTCCGGAGACATGAACAATGCAGTTTTAAATAGTGTGGCAAATTCAGGACCCAGTGTGGGTGCAAGTTCATTAGTTACAGATGCAAACTCTGCCCTTTCAGGGGGGCCACATTTGCAAAGGAGTGCAAGCATCAATACAGAGTCATACATGCGTTTGCCTGCATCGCCCATGTCATTCAATTCAAATAACATTAGTGTGTCAGGCTCCTCGGTTATTGATGGATCCTGCGTAGTGCAGCAAAATTCTCACCAGGACCAAAATATCCAACACGTGCAGCAACATACACATCAAGGTGCTTCACATGCCACATCTTTACCTACATCACAAATAGACCAAGTATCATTTCCGATGGGTGCTAAACGTCAGGGATCTTTCATTCCAGATCCAAATAACTATTCTCAGGTGCAGAAGAAACCACGGCTAGATATAAAGCAGGAAGATATGCTGCAACAGCAAGTTTTGCAGCAGCTATTTCAGAGACAGGATTCCATGCTGTCACAAAACCGTAACTCACAATTACAAGCTTTATTTCAACAGCAAAGAATGCGGCAACAGCAGCAAATTTTGCATTCTCTACCTCAGTACAGGGCTCAGTTTCAGCAGCAGCAGCAGATACAGATGAGGCAGCAATTGCAACAACAACAGCAAGCAATGCTGCCAGGATCACCCATGAATCGGCCTTCATATGATACTGGTGGTGTTTGTGCCCGTCGGCTGATGCAATATCTATATCATCTGCGACAAAGACCTCCTGAGAATAGTATAGCCTACTGGAGAAAGTTTGTAACAGAGTATTACTCTCCTCGTGCGAAGAAAAGATGGTGCTTGTCATTGTATGAGAATGTTGGCCACCACGCTCTTGGTGTGTTTCCCCAGGCAGCTATGGATGCATGGCAGTGCGACATCTGTGGTTCCAAATCAGGAAGGGGCTTTGAGGCTACATTTGAAGTACTCCCGAGACTCAGTGAGATCAAATTTGGAAGTGGAGTTATTGATGAGTTTTTAATTCTGGAATGTCCTCAAGAAAGGAGATTATCTTCCGGAATTATGCTGTTAGAATATGCAAAAGCATTTCAAGAGAGTGTATATGAGCAACTTCGTGTTGTTCGTGAGGGTCAGCTTCGTATAATATTCACGCAAGACTTGAAGATTTTGTCTTGGGAATTTTGTGCACGGCGTCATGAAGAACTTCTTCCACGTAGGTTGGTTGCATCTCAGGTGAATCAGCTGGTACTGGTTGCCCAGAAATGCCAAAGCACAATAGCTGAAAGTGGGCCTGATGGTGTTTCTCAGAAAGATTTGCAGACGAATAGCAATATGAGCAAAAACTTCTTGAATGCATCAATTTCTGGTCAAGCTGCTTCTGTTGTACACTGTGGGGAGGTGCTGGCAGCTGGTCGTCAGCTTGCAAAGAGTCTGGAGTTGCAGTTGCTGAATGACTTGGGTTTCCCTAAAAGATACGTGAGGTGTTTGCAGATATCGGAGGTTGTCAACAGTATGAAAGATCTTATTGGTTTCTGCCGGGATCAAAAACTTGGGCCTATTGAGGGCTTGAAAAATTATCCTAGACATGCCACTGCAGCCAAGCTCAAGATGCAAAAGATGCAGGAGATGGAACAGTTAGCAAGTATTCAAGGTCTTCCCACAACAGTAAATAAGCTGATGGCAATGCATCCTGAACATGATAACCATGGGATTAATAACCATCAGATGATTGGTCGAGGAGGTTTGAGTGGTTCGGCACAAGCTGCTTTGGCAATGACTACGTACCAGAATATCCTCATGAGACAAAGCTCTATGAACTCCAATCCCAGCCCACGTCAACAGGAGGCCTTGTCTTCTTTCAATAATTCCAACTATAATCCATCCCCTACACTCCAGGGGAATGCATTCTTGATGCCTGGGTCCATACAGAACTCTGTTGGTAGCTTTTCAAGCGCCCAGCAAACCTTGCAAAAGCAATCGCAGCAGCTGCAACAGCATCCACCAAATGCTGGCTCCTTGGTCCAACAAAATTATCCTCAGACGATTCAAGGTAGCCAGGCCCTTCAGCAACAGATGATCCAGGAGCTACTGCAGATGTCTAGTAACAGTAAGAGTGGCGGTTTGCAACAGCCACCCCTTACCGGACCAAATGCAAATAGAAGTTTGACAAGAAGGGGTACGGGTTTTGTGGGAAACACCTCAGTTGCAGCTGTGGCATCTGGAAATCTGTCTGGGAGCAATGCCCCTTGCCCTGGTCCGAGTAGAAGCAATAGCTTCAAAGCTGCTTCAAATAGCGAGTGCTCTGCTGGTAATAGTGGGTTCAATCAAAAGGCTTCTGATTTTCCGGAAGACCTTCATCTGCCAGAAAGTTTGGTTGAAGATATAGGCCAAGATTTCCCTGAAAACGGGTTCCTTAACAATGACCTTGATGATGATTTGGGTTATGTCTGGAAGGCCTGA 2616 45.22 MASSRLAGGLAQSPSSSGIFYQGEGQSPAIVNSHLGQSFANSSNSIPGTGCSDFGPVSGDMNNAVLNSVANSGPSVGASSLVTDANSALSGGPHLQRSASINTESYMRLPASPMSFNSNNISVSGSSVIDGSCVVQQNSHQDQNIQHVQQHTHQGASHATSLPTSQIDQVSFPMGAKRQGSFIPDPNNYSQVQKKPRLDIKQEDMLQQQVLQQLFQRQDSMLSQNRNSQLQALFQQQRMRQQQQILHSLPQYRAQFQQQQQIQMRQQLQQQQQAMLPGSPMNRPSYDTGGVCARRLMQYLYHLRQRPPENSIAYWRKFVTEYYSPRAKKRWCLSLYENVGHHALGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLSEIKFGSGVIDEFLILECPQERRLSSGIMLLEYAKAFQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVASQVNQLVLVAQKCQSTIAESGPDGVSQKDLQTNSNMSKNFLNASISGQAASVVHCGEVLAAGRQLAKSLELQLLNDLGFPKRYVRCLQISEVVNSMKDLIGFCRDQKLGPIEGLKNYPRHATAAKLKMQKMQEMEQLASIQGLPTTVNKLMAMHPEHDNHGINNHQMIGRGGLSGSAQAALAMTTYQNILMRQSSMNSNPSPRQQEALSSFNNSNYNPSPTLQGNAFLMPGSIQNSVGSFSSAQQTLQKQSQQLQQHPPNAGSLVQQNYPQTIQGSQALQQQMIQELLQMSSNSKSGGLQQPPLTGPNANRSLTRRGTGFVGNTSVAAVASGNLSGSNAPCPGPSRSNSFKAASNSECSAGNSGFNQKASDFPEDLHLPESLVEDIGQDFPENGFLNNDLDDDLGYVWKA 871
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 731820 740215 - Carg16697-RA Car16g00126 163278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00126 871 MobiDBLite consensus disorder prediction 794 833 - -
Car16g00126 871 Pfam LIM-domain binding protein 295 576 IPR029005 -
Car16g00126 871 MobiDBLite consensus disorder prediction 794 830 - -
Car16g00126 871 MobiDBLite consensus disorder prediction 754 779 - -
Car16g00126 871 MobiDBLite consensus disorder prediction 655 727 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car15g01273 Car16g00126 CCT
Car15g01273 Car16g00126 ECH
Car16g00126 Car18g01131 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00788 Car-Chr2:5733095 Car16g00126 Car-Chr16:731820 0 dispersed
Car15g01273 Car-Chr15:9945714 Car16g00126 Car-Chr16:731820 0 dispersed
Car16g00126 Car-Chr16:731820 Car18g01131 Car-Chr18:11251224 1.14E-178 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00126 - - csv:105434391 1313.13