Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00143 ATGCCGAGAGCGCGGTGCCGTAGAATAGAGATGCGACGATTAGAAACAGTACCGTCGAAGAAACGTGTGCGGAAGACGGACAGCGACGGTTCTCCGGAGATTTCATCTTCTTCGTCATCGGGGGAGGACGTGAAGACTGTAGAAGCTTCACCGTCGGTACCTCAGCCTGTGTTCGGGATGATGTCGGTGTCCGGAAGGTCACGTGAGATGGAGGATGCAGTATCGACGAGCTTATGCCTTCTAGGTCCAGGAAATTTCCGGCGGCGACCGGTGCATTTCTTCGCCGTCTACGATGGACACGGAGGCCCTCACGTGGCAGCGCTATGTAGGGAGAAGATGCACGTGTTAGTACAAGAGGAATTGGCGCGCGTGGTGAGTGGCGGCGGAGGAAGCAGTGCGGCGGAGGAGGCTAAGGTGGAGGAGGAGGCGACTTGGAAAAGAGTGATGCGGAGGAGCTTTGAGAGAATGGACGAAGTGGCACTCAGTACTTGTGCCTGTGGAAGCGTCGGAGGCCAGTGTAGGTGCCATCCAATGGAGGTGGCTCTTGGCGGCTCCACCGCCGTCGTTGCCGTGCTCACCCCGGATCACATAATGGTCGCCAACTGCGGTGACTCACGCGCCGTCCTCTGCCGAGGAGGAAGGGCCATTCCGCTTTCCAATGATCACAAGCCTGATAGAAATGATGAACTAGCAAGAATCGAAGCCGCTGGAGGACGAGTGATTTTCATAAATGGAGCTCGGGTTGAAGGAATCCTGGCAATGTCCCGTGCAATAGGTGACAAATATCTCAAGTCAGTTGTAATATCAGAGCCTGAAATTACTTTCACCAGAAGAGAATCAGATGACGAATGTTTAATACTTGCAAGTGATGGTTTGTGGGATGTTCTTTCAAGTGAGTTGGCTTGTGAGGTAACTCGAGAATGTCTCCAAGAAAGAACGGCCGCTGCTGCTGCTACTACTACTACGATAGACCTCAACGCCGAGCCTCAAATTGAAGAAGGGGCTGGAACTTCATACCCTTCTCGAAGTTCACTAGCTGCAGCACTGCTGACTCGTCTAGCTTTGGGGCGGAGAAGCATGGACAACATCAGTGTTATAGTTATTGATCTAAAGAGGAGCTGA 1122 52.94 MPRARCRRIEMRRLETVPSKKRVRKTDSDGSPEISSSSSSGEDVKTVEASPSVPQPVFGMMSVSGRSREMEDAVSTSLCLLGPGNFRRRPVHFFAVYDGHGGPHVAALCREKMHVLVQEELARVVSGGGGSSAAEEAKVEEEATWKRVMRRSFERMDEVALSTCACGSVGGQCRCHPMEVALGGSTAVVAVLTPDHIMVANCGDSRAVLCRGGRAIPLSNDHKPDRNDELARIEAAGGRVIFINGARVEGILAMSRAIGDKYLKSVVISEPEITFTRRESDDECLILASDGLWDVLSSELACEVTRECLQERTAAAAATTTTIDLNAEPQIEEGAGTSYPSRSSLAAALLTRLALGRRSMDNISVIVIDLKRS 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 821371 826904 - Carg16714-RA Car16g00143 163295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00143 373 MobiDBLite consensus disorder prediction 30 46 - -
Car16g00143 373 ProSiteProfiles PPM-type phosphatase domain profile. 57 370 IPR001932 -
Car16g00143 373 MobiDBLite consensus disorder prediction 1 58 - -
Car16g00143 373 Pfam Protein phosphatase 2C 58 325 IPR001932 -
Car16g00143 373 ProSitePatterns PPM-type phosphatase domain signature. 93 101 IPR000222 GO:0043169
Car16g00143 373 MobiDBLite consensus disorder prediction 1 29 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car16g00143 Car18g01109 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00056 Car-Chr16:379458 Car16g00143 Car-Chr16:821371 7.78E-72 dispersed
Car01g00570 Car-Chr1:3354591 Car16g00143 Car-Chr16:821371 6.17E-85 transposed
Car15g00113 Car-Chr15:657134 Car16g00143 Car-Chr16:821371 3.67E-77 transposed
Car16g00143 Car-Chr16:821371 Car18g01109 Car-Chr18:11090735 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00143 K14497 - csv:101206634 560.836