Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00185 ATGCTCTTCTCTTTGCCAAAGCCATCAAGCTCTTCCCTTTTGGTTTCTAAGCTTCCAAGAACCACACTTTTCCATCCAAACAAGATGACCCAGTTCTTGAATCTTGCTCTTGGAGTGTTTTTTGTTCTGGGTTTGGCTGTTCTTCTTCTCATCTTCTTGAACAGAAGGGGAAAGGGGAAGGATGGCGATGGATTCAATGACTTGGAGAGGAACCAGCAGAGTGCGAAAGGGGCGGAGGAGAGTGAAGACTTGCTGACATTTCAAGGTGGGCAGGACCTTACCATTTTGGATATCTTGGAAGCTCCTGGGGAAGTCATTGGCAAAGCCAACCATGGAACTCTGTATAAGGCTTACTTGCAAGGTAGCAGCACGGTGCGGCTGCTTAGGTTTCTGAGGCCTGTTTGCACTGCTGGGCATGATGATTTTGTCAGTGAAATAGAGTTTTTGGGTTCCATAAGACACCCAAATTTGGTGCCTCTTTTGGGATTCTATTCAGGTCCAAGAACAGAGAAGCTTCTCATTCATCCATTCTACAGGCGAGGAAATCTAGCTCAGTTCATCAGAGATGGGAATGGTGACTCGCACCGATGGGGAGTAATAAACAAGATCTCAATCGGTATAGCGAAAGGGTTGGATCATCTCCACACTGGCTTGCAAAAGCCAACAATCCATGGGAATCTACAGTCGAAAAATGTTCTTTTGGATCGGAACTATGAACCGTATGTCTCGGATTTCGGTCTACATCTACTGTTGAATTCCTCTTCTGCTCAAGAGGTGCTTGAAGGTTTAGCAGCTAATGGCTACAAAGCTCCTGAGGTGATCAAGATGAAGGATGCAACAGAGGAGACTGATGTTTATAGTTATGGGGTGATCTTACTCGAGCTACTTTCGGGGAAGGAACCGGTTAACGAAAAGCCAGCTTTCGATGAGGATTTTTACTTGCCTAACTTTATGAGAAATGCAGTTCTTGGACATAGAATTGCAGATCTGTTCCATCCAGAAATACTTCTATACAGCAGCATTGATGGAAACAATGTTACTGAAGAAAAGATTCTCAAATTCTTTCAGCTTGCAATGGCGTGTTGTTCGCCGTCTCCAGCTCTTAGGCCTAGTATGAAGCAAGTGCTTCGAAAGCTCAATGAAATCGGAACGTAA 1155 44.68 MLFSLPKPSSSSLLVSKLPRTTLFHPNKMTQFLNLALGVFFVLGLAVLLLIFLNRRGKGKDGDGFNDLERNQQSAKGAEESEDLLTFQGGQDLTILDILEAPGEVIGKANHGTLYKAYLQGSSTVRLLRFLRPVCTAGHDDFVSEIEFLGSIRHPNLVPLLGFYSGPRTEKLLIHPFYRRGNLAQFIRDGNGDSHRWGVINKISIGIAKGLDHLHTGLQKPTIHGNLQSKNVLLDRNYEPYVSDFGLHLLLNSSSAQEVLEGLAANGYKAPEVIKMKDATEETDVYSYGVILLELLSGKEPVNEKPAFDEDFYLPNFMRNAVLGHRIADLFHPEILLYSSIDGNNVTEEKILKFFQLAMACCSPSPALRPSMKQVLRKLNEIGT 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1062096 1063823 - Carg16756-RA Car16g00185 163337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00185 384 Pfam Protein tyrosine and serine/threonine kinase 104 378 IPR001245 GO:0004672|GO:0006468
Car16g00185 384 ProSiteProfiles Protein kinase domain profile. 100 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g01222 Car-Chr15:9541669 Car16g00185 Car-Chr16:1062096 5.66E-104 dispersed
Car16g00185 Car-Chr16:1062096 Car17g01159 Car-Chr17:8944334 8.12E-68 dispersed
Car16g00185 Car-Chr16:1062096 Car02g00723 Car-Chr2:5361186 1.44E-100 wgd
Car16g00185 Car-Chr16:1062096 Car04g00329 Car-Chr4:1831271 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89426 PF07714 PK_Tyr_Ser-Thr 3.60E-32 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00185 - - cmax:111483478 709.909