Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00212 ATGGAGAGTTTTGCCCTCCAATCTGTCTCCACCACCGCTTCCTTGCCCCGCCATTCTCCCATTGCTCGAATTTCTCTCCTCCACCGCCGGAAATCCATTCCCCATTCCCAGTCCTTTCCCACTTCCCCTTGTTTATATCGCTCGGTTTCGCTATTTCAATCAGCCCCACCGATCCCCCAATCCCCCCTTTTCATTTCCCGATCTTCTTCCCTTTTCAATCCGCTTTTCAATCCCAAATTGCGGCGAACCCATCAATTACGAACCAGTGCCTCTCAATCACCGGAGAAGCAGCCACTGCCGCCGACCCCACTTCCCCAACAAGGTGCTAAACCAATCCCTTTTCTGATTTCCATCGCAATTGGTTTAATTGTTCGTTTTGCCATCCCGAAACCGGTGGAGGTTTCTGCCCAAGCGTGGCAGTTGCTCTCGATTTTCTTGTCCACGATTGCTGGACTCGTTTTGAGTCCCTTGCCGGTGGGTGCTTGGGCGTTTCTTGGCCTCACTATGACTGTTGTTACTAAGACTTTGACGTTTGCTTCTGCTTTTAATGCTTTCACTAGTGAGGTGATTTGGTTGATTGTTATTTCATTCTTTTTCGCTCGTGGGTTTGTCAAAACTGGGTTGGGGGATCGAATTGCGACGTATTTTGTTAAATGGATGGGGAAGAGTACGCTTGGTTTATCTTACGGTTTGACGTTCAGTGAGGCATTGATTGCCCCTGCCATGCCCAGCACTACGGCCAGGGCTGGCGGTGTGTTCTTGCCCATTATCAAGTCCTTGTCGCTTGCTGCTGATAGTAAACCCAACGACCCATCGTCTAAAAAGATCGGTGCTTATCTAATTCAGTCTCAGTTTCAGAGTGCTGGTAACTCTAGTGCCCTTTTCCTAACTGCTGCTGCTCAAAACTTATTGTGCCTTAAACTGGCTGAAGAACTTGGTGTCCAAATATCTAGCCCCTGGCTTACTTGGGCCAAAATTGCTAGTGTGCCAGCCATCATTTGTCTCTTAACAACTCCAGCAATCTTATACAAGCTGTTTCCTCCCGAAACCAAGAACACACCCGACGCCCCAGCCATGGCGACGAAAAAGTTGGAGGCTATGGGTCCTGTCACCAAAAATGAATGGGTCATGGTCGGTACCATGCTTATTGCAGTCTCGTTATGGATAGCTGGAGAGGCCCTTCAAATTCCTAGTGTTGTAGCTGCAATGATTGGTTTATCAACACTCCTTACACTCGGAGTCCTAAACTGGGAAGACTGCTTAGCCGAAAAGTCGGCCTGGGACACGTTGGCTTGGTTTGCTGTCCTCGTGGGCATGGCGGGCCAATTGACGAGTCTCGGTCTGGTTGGCTGGATGTCCAATTGTGTGGCCACGTTGCTGAAGTCTCTTTCTCTCAGCTGGCCTGCAGCTTTTGCTATTCTTCAGCTATCTTACTTCTTTGTTCACTACCTCTTCGCAAGCCAGACCGGTCACGTCGGAGCTTTATACTCGGCATTCCTTGCGATGCACTTGGCTGCCAAGGTGCCTGGGGTATTGGCAGCTCTCGCCTTAGCTTACAACACGAATCTCTTCGGCGCTCTGACTCATTACAGCAGTGGTCAAGCTGCTGTATACTATGGAGCGGGTTATGTCGACCTACCAGATGTATTCAAAATCGGGTTCGTGATGGCGCTCGTAAACGGTATTATCTGGATTGTGGCTGGAGGTATTTGGTGGAAGGTTCTTGGTTTATACTGA 1737 49.4 MESFALQSVSTTASLPRHSPIARISLLHRRKSIPHSQSFPTSPCLYRSVSLFQSAPPIPQSPLFISRSSSLFNPLFNPKLRRTHQLRTSASQSPEKQPLPPTPLPQQGAKPIPFLISIAIGLIVRFAIPKPVEVSAQAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTMTVVTKTLTFASAFNAFTSEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTFSEALIAPAMPSTTARAGGVFLPIIKSLSLAADSKPNDPSSKKIGAYLIQSQFQSAGNSSALFLTAAAQNLLCLKLAEELGVQISSPWLTWAKIASVPAIICLLTTPAILYKLFPPETKNTPDAPAMATKKLEAMGPVTKNEWVMVGTMLIAVSLWIAGEALQIPSVVAAMIGLSTLLTLGVLNWEDCLAEKSAWDTLAWFAVLVGMAGQLTSLGLVGWMSNCVATLLKSLSLSWPAAFAILQLSYFFVHYLFASQTGHVGALYSAFLAMHLAAKVPGVLAALALAYNTNLFGALTHYSSGQAAVYYGAGYVDLPDVFKIGFVMALVNGIIWIVAGGIWWKVLGLY 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1202372 1206075 + Carg16784-RA Car16g00212 163364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00212 578 MobiDBLite consensus disorder prediction 85 105 - -
Car16g00212 578 Pfam Sodium:sulfate symporter transmembrane region 114 577 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00378 Car-Chr4:2149177 Car16g00212 Car-Chr16:1202372 0 dispersed
Car16g00212 Car-Chr16:1202372 Car20g00065 Car-Chr20:355003 2.67E-158 dispersed
Car16g00212 Car-Chr16:1202372 Car02g01038 Car-Chr2:7243937 9.62E-162 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00212 - K03319 csv:101213018 981.859