Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car16g00219 | ATGGATAACTTATGCTGCTTCAATTCTGTTTATTCTCAGTTTGTAGGAGGTCGTTCGCCCGGTAGCTCTGGAAAGGGCAGGGGCAACCAATGCCCTGCCAGGTATGGCTTTAGCTTAGTAAAAGGGAAAGCAAACCATCCCATGGAAGACTATCATGTTGCTAAATTTATAACAGTGCATGGCCATGAGCTAGGCCTTTTCGCCATATATGATGGACACTTAGGAGACAGTGTACCAGCCTATCTTCAGAAGCATCTGTTTCCTAATATACTGAATGATGAGGAATTCTGGTCGAATCCCCGTAGCTCGATCTTTAAGGCTTACGAGACGACAGACCAAGCGATACTCTCACACAGTCCTGACTTGGGAAGAGGTGGATCCACCGCGGTCACTGCAATTTTGATAAACGGTCAGAAATTATGGGTGGCTAATGTTGGAGATTCACGAGCAGTCCTTTCGAGAAAAGGGCAGGAAGAGCAAATGTCGGTTGATCACGAGCCAAACACCGAGCGAGGAAGTATTGAGGACAGAGGTGGATTCGTCTCTAACATGCCAGGAGACGTTGCAAGAGTGAACGGGCAGCTAGCAGTTTCTCGAGCATTTGGCGACAAGAATCTCAAGACACACTTACGATCTGATCCCGACATAAAGAATGCTGATATCGACTCCGACACCGAGCTTCTTATCTTAGCAAGTGATGGTCTATGGAAGGTGATGACGAATCAAGAAGCGGTGGATATAGCAAGAAGAACGAAGGATCCGCAGCGGGCAGCAAAACAATTAGCAGCAGAAGCGTTGAAACGGGAAAGCAAAGACGACATCTCGATCATCGTAGTATGTTTCAAAGGCTAA | 852 | 46.83 | MDNLCCFNSVYSQFVGGRSPGSSGKGRGNQCPARYGFSLVKGKANHPMEDYHVAKFITVHGHELGLFAIYDGHLGDSVPAYLQKHLFPNILNDEEFWSNPRSSIFKAYETTDQAILSHSPDLGRGGSTAVTAILINGQKLWVANVGDSRAVLSRKGQEEQMSVDHEPNTERGSIEDRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIKNADIDSDTELLILASDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDISIIVVCFKG | 283 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 16 | 1235974 | 1238847 | - | Carg16791-RA | Car16g00219 | 163371 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car16g00219 | 283 | MobiDBLite | consensus disorder prediction | 153 | 173 | - | - | |
| Car16g00219 | 283 | ProSiteProfiles | PPM-type phosphatase domain profile. | 34 | 281 | IPR001932 | - | |
| Car16g00219 | 283 | MobiDBLite | consensus disorder prediction | 153 | 177 | - | - | |
| Car16g00219 | 283 | Pfam | Protein phosphatase 2C | 43 | 274 | IPR001932 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car09g00489 | Car-Chr9:2729001 | Car16g00219 | Car-Chr16:1235974 | 4.22E-145 | dispersed | |
| Car11g01599 | Car-Chr11:12642670 | Car16g00219 | Car-Chr16:1235974 | 6.27E-10 | dispersed | |
| Car11g01601 | Car-Chr11:12750873 | Car16g00219 | Car-Chr16:1235974 | 1.28E-109 | dispersed | |
| Car16g00058 | Car-Chr16:387816 | Car16g00219 | Car-Chr16:1235974 | 3.49E-58 | dispersed | |
| Car16g00219 | Car-Chr16:1235974 | Car18g01219 | Car-Chr18:11737181 | 1.46E-56 | dispersed | |
| Car16g00219 | Car-Chr16:1235974 | Car04g00370 | Car-Chr4:2105137 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car16g00219 | K17506 | - | csv:101214223 | 533.487 |