Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00219 ATGGATAACTTATGCTGCTTCAATTCTGTTTATTCTCAGTTTGTAGGAGGTCGTTCGCCCGGTAGCTCTGGAAAGGGCAGGGGCAACCAATGCCCTGCCAGGTATGGCTTTAGCTTAGTAAAAGGGAAAGCAAACCATCCCATGGAAGACTATCATGTTGCTAAATTTATAACAGTGCATGGCCATGAGCTAGGCCTTTTCGCCATATATGATGGACACTTAGGAGACAGTGTACCAGCCTATCTTCAGAAGCATCTGTTTCCTAATATACTGAATGATGAGGAATTCTGGTCGAATCCCCGTAGCTCGATCTTTAAGGCTTACGAGACGACAGACCAAGCGATACTCTCACACAGTCCTGACTTGGGAAGAGGTGGATCCACCGCGGTCACTGCAATTTTGATAAACGGTCAGAAATTATGGGTGGCTAATGTTGGAGATTCACGAGCAGTCCTTTCGAGAAAAGGGCAGGAAGAGCAAATGTCGGTTGATCACGAGCCAAACACCGAGCGAGGAAGTATTGAGGACAGAGGTGGATTCGTCTCTAACATGCCAGGAGACGTTGCAAGAGTGAACGGGCAGCTAGCAGTTTCTCGAGCATTTGGCGACAAGAATCTCAAGACACACTTACGATCTGATCCCGACATAAAGAATGCTGATATCGACTCCGACACCGAGCTTCTTATCTTAGCAAGTGATGGTCTATGGAAGGTGATGACGAATCAAGAAGCGGTGGATATAGCAAGAAGAACGAAGGATCCGCAGCGGGCAGCAAAACAATTAGCAGCAGAAGCGTTGAAACGGGAAAGCAAAGACGACATCTCGATCATCGTAGTATGTTTCAAAGGCTAA 852 46.83 MDNLCCFNSVYSQFVGGRSPGSSGKGRGNQCPARYGFSLVKGKANHPMEDYHVAKFITVHGHELGLFAIYDGHLGDSVPAYLQKHLFPNILNDEEFWSNPRSSIFKAYETTDQAILSHSPDLGRGGSTAVTAILINGQKLWVANVGDSRAVLSRKGQEEQMSVDHEPNTERGSIEDRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIKNADIDSDTELLILASDGLWKVMTNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDISIIVVCFKG 283
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
16 1235974 1238847 - Carg16791-RA Car16g00219 163371
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car16g00219 283 MobiDBLite consensus disorder prediction 153 173 - -
Car16g00219 283 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Car16g00219 283 MobiDBLite consensus disorder prediction 153 177 - -
Car16g00219 283 Pfam Protein phosphatase 2C 43 274 IPR001932 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00489 Car-Chr9:2729001 Car16g00219 Car-Chr16:1235974 4.22E-145 dispersed
Car11g01599 Car-Chr11:12642670 Car16g00219 Car-Chr16:1235974 6.27E-10 dispersed
Car11g01601 Car-Chr11:12750873 Car16g00219 Car-Chr16:1235974 1.28E-109 dispersed
Car16g00058 Car-Chr16:387816 Car16g00219 Car-Chr16:1235974 3.49E-58 dispersed
Car16g00219 Car-Chr16:1235974 Car18g01219 Car-Chr18:11737181 1.46E-56 dispersed
Car16g00219 Car-Chr16:1235974 Car04g00370 Car-Chr4:2105137 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00219 K17506 - csv:101214223 533.487