Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00225 ATGGCTGACGGTGAATTAGAGAGGGGAGAGGTCAATTGTAGGCTTGCTTCCATGGATTCCTCCGAGTCCCGATGGGTATTTCAGGATGAGGATCAATCGGACATCGACGAGGAGGCGGAGGACGAGGAGGACGAGGAGAATGCAGCGCAGCATCGTATGGATTTGGAGTCTGAGGAAGAAGATAATGTTGAGCAGAAATTGATTCGGACTGGCCCACGTATTGATTCCTTCGATGTCGAAGCTCTTGAGGTCCCTGGTGCACATAGAAATGAATACGAGGACTTCAGCGTGGGAAAGAAAATTACTCTTGCTTTTCAAACCCTTGGAGTTGTATTTGGTGGTACTTTTGCTTTGTACTCTTTGATTTGTAGACATGCCAAGGTCAGTCTACTCCCAAATCAACTGCCTTCAGATACCCGAATATCACGTTTTAGGTTAAAGGTGCCATCTCCTGAATTGGAAAGATCACTAAGAATAAAGGAAAAACTTGAGGCTTCCCTGACTTTAAAGAAGCTTCTCTTGATGCTTGTTCTTGCTGGAACTTCTATGGTAATAGCCGATGGAGTTATTACACCCGCCATGTCAGTAATGTCGGCTGTTGGTGGACTAAAGATTGGAGTGGATGCGATCAATCAAGATGAGGTTGTGATGATCTCAGTTGCCTGTCTTATAGTTTTGTTCAGTGTTCAGAAGTATGGCACTAGCAAAGTGGGGCTCGCTCTTGGTCCTGCATTATTCATATGGTTTTGTACGCTTGCAGGCATGGGGATTTATAACCTTGTCATATATGATAGCAGTGTCTTAAAGGCATTCAATCCTGTTCATATTTATTATTTCTTCAAGAGGAACTCTATCAATGCATGGTATTGCCTTGGAGGTTGTTTATTATGTGCTACAGGTTCGGAGGCAATGTTTGCGGATCTTTGCTATTTCTCTGTGCAGTCAATACAGCTTACGTTTGTGTTTCTTGTCTTGCCTTGTCTTTTATTGGGTTATTTGGGTCAAGCTGCCTACCTTATATCAAACCACAATGGAGCTGAGCACGTATTTTTTAATTCTGTTCCCAAAAGTGCCTTTTGGCCAGTTTTTTTCATTGCTAATGTTGCTGCATTAATTGCGTGTCGAGCAATGACTACGGCTACCTTTTCGTGTATAAAACAATCAACGGCACTTGGTTGTTTTCCTCGTCTTAAGATCATTCATACATCTAGGAAATTCATGGGGCAAATCTATATCCCGGTGTTGAATTGGTTTTTGTTGGCAGTTTGCCTGGTGGTTGTCTGCTCCATTTCTAGCATGTACGAGATTGGAAACGCATATGGTATCGCTGAGCTCGGAGTGATGATGATGACTACTGTCTTGGCAACCATTGTTATGCTTCTTATATGGCAGATAAACATTATCATTGTAATGGGTTTTGCGATGATCTTTCTTGGGATGGAACTGATATTTTTCTCGTCTGTGTTATGGGGTGTGGGTGATGGAAGTTGGATCATATTGGTCTTCGCAGTGATTATGTTCTTCATTATGTATATTTGGAACTACGGAAGCAAGCTCAAATATGAAACTGAAGTGAAGCAAAAGCTGTCAATGGATCTAATGCGGGAGCTTGGGTGCAACCTTGGGACACTCAGAGCTCCTGGCATCGGTTTGCTATATAATGAACTAGTGAAAGGAATACCTGCAGTATTTGGCCAGTTTCTGACTACTCTTCCTGCAGTTCATTCAATGATCATATTTGTCTGCATCAAGTACGTACCGGTTCCTGTCGTGCCTCAGAGTGAGAGATTTCTGTTCCGCCGAGTCTGCCCGAAGAGCTATCACATCTTTCGTTGCATTGCCAGCCTCGAGAAATTCATCCGTCGAGAAGCACAAGAAAGGTCGTTAGAGAGCGAGGGAGACGATGATACTGATTCCAACGAAATCCACAGCTCTCGACTTCTTGTTGGTCCAAATGGAAGTGTCTATTCGCTTGGCATTCCTCTGCTTGCTGAATTCAACGAGGCTAGACCCATAAGTGAAGTCATCCACGTCCCAGAAGAAGTGCAGGCAGTGGAATCTCTAGATCCCTCAATCCCAGATGCAGAACAATCACTTGAGAGAGAGCTTTCTTTTATACGAAAGGCTAAAGAATCAGGAGTGGTTTACCTTCTCGGCCATGGAGATATTAGAGCCAGAAAGGATTCTTGGTTTATTAAGAAGCTAGTGATCAATTACTTCTACGCATTTTTAAGAAAGAACAGCCGGCGGGGCATTGCCAACTTGAGTGTCCCCCATACCCACCTGATGCAGGTTGGCATGACATACATGGTTTAG 2316 43.65 MADGELERGEVNCRLASMDSSESRWVFQDEDQSDIDEEAEDEEDEENAAQHRMDLESEEEDNVEQKLIRTGPRIDSFDVEALEVPGAHRNEYEDFSVGKKITLAFQTLGVVFGGTFALYSLICRHAKVSLLPNQLPSDTRISRFRLKVPSPELERSLRIKEKLEASLTLKKLLLMLVLAGTSMVIADGVITPAMSVMSAVGGLKIGVDAINQDEVVMISVACLIVLFSVQKYGTSKVGLALGPALFIWFCTLAGMGIYNLVIYDSSVLKAFNPVHIYYFFKRNSINAWYCLGGCLLCATGSEAMFADLCYFSVQSIQLTFVFLVLPCLLLGYLGQAAYLISNHNGAEHVFFNSVPKSAFWPVFFIANVAALIACRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVLNWFLLAVCLVVVCSISSMYEIGNAYGIAELGVMMMTTVLATIVMLLIWQINIIIVMGFAMIFLGMELIFFSSVLWGVGDGSWIILVFAVIMFFIMYIWNYGSKLKYETEVKQKLSMDLMRELGCNLGTLRAPGIGLLYNELVKGIPAVFGQFLTTLPAVHSMIIFVCIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIASLEKFIRREAQERSLESEGDDDTDSNEIHSSRLLVGPNGSVYSLGIPLLAEFNEARPISEVIHVPEEVQAVESLDPSIPDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLVINYFYAFLRKNSRRGIANLSVPHTHLMQVGMTYMV 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1259509 1266516 + Carg16797-RA Car16g00225 163377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00225 771 Coils Coil 39 59 - -
Car16g00225 771 Pfam K+ potassium transporter 110 612 IPR003855 GO:0015079|GO:0016020|GO:0071805
Car16g00225 771 MobiDBLite consensus disorder prediction 31 45 - -
Car16g00225 771 MobiDBLite consensus disorder prediction 46 63 - -
Car16g00225 771 MobiDBLite consensus disorder prediction 22 63 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00225 Car-Chr16:1259509 Car14g01219 Car-Chr14:10591000 0 dispersed
Car16g00225 Car-Chr16:1259509 Car04g00368 Car-Chr4:2084626 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00225 - - csv:101214942 1319.29