Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00304 ATGGGCAGCATTGAATCCGACAGAACCGTTACCGGTCTTGCCGCCAAAGACCCGTCCGGGATTCTGTCTCCCTACACTTATACTCTCCGAAACACCGGCCCGGATGATGTTTTCATCAAAGTGATTTGCTGTGGAATCTGTCACTCTGATCTTCACCAAATCAAGAATGAACTCGGCATGTCCAATTACCCCATGGTTCCTGGACATGAAGCGGTCGGAGAAGTGGTTGAGGTTGGATCGGAAGTGAGTCGATTCAGAGTTGGGGATTTGGTCGGTGTTGGGTGTATTGTTGGATCCTGTTCGAGTTGCGGTCCTTGTAATTCCGATAAGGAGCAGTACTGTAACAAGAAGATCTGGACCTATAATGATGTGTATCTCGACGGCCGACCCACTCAAGGTGGTTTCTCCTCCGCCATGGTCGTGCACCAAAAGTTTGTGGTGAAAATCCCTGAAGGGATGTCGCCGGAGCAGGCGGCGCCGCTGTTGTGCGCGGGAGTGACGGTGTACAGCCCACTGAGCCACTTTGGACTGAAACAGAGTGGGCTAAGAGGCGGAATTTTGGGGCTGGGCGGCGTTGGGCATATGGGCGTGCAAGTGGCGAAGGGTTTGGGCCACCACGTGACGGTGATAAGCTCGTCGGAGAAGAAGAGGAAGGAAGCTCTGGAACATCTCGGCGCAGACGAGTACTTGGTCAGCTCCGACGCAACTCAAATGGAACAAGCCGTAGGCTCGCTGGATTACATCATCGACACAGTCCCTGTTTTTCATCCGCTCGAACCGTACCTCTCTCTGCTAAAACTCGACGGCAAATTGATCATGCTGGGTGTCATTAACACCCCAATGCAATTCGTTTCGCCTCTCCTTATGCTCGGGAGGAAGACGATTGCCGGGACCTTCATCGGAAGCATGACGGAGATACAAGAGGTGCTGGATTTCTTCCAAGAGAAGGAGCTGACCTCCACGATTGAAGTGGTAAAGCTGGATTACATAAACAAGGCTCTGGAAAGGTTGGAGAAGAACGATGTTAGATACAGGTTCGTTGTCGATGTAGCCGGAAGTAAGTTCCCGGAGTGA 1074 52.05 MGSIESDRTVTGLAAKDPSGILSPYTYTLRNTGPDDVFIKVICCGICHSDLHQIKNELGMSNYPMVPGHEAVGEVVEVGSEVSRFRVGDLVGVGCIVGSCSSCGPCNSDKEQYCNKKIWTYNDVYLDGRPTQGGFSSAMVVHQKFVVKIPEGMSPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVQVAKGLGHHVTVISSSEKKRKEALEHLGADEYLVSSDATQMEQAVGSLDYIIDTVPVFHPLEPYLSLLKLDGKLIMLGVINTPMQFVSPLLMLGRKTIAGTFIGSMTEIQEVLDFFQEKELTSTIEVVKLDYINKALERLEKNDVRYRFVVDVAGSKFPE 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1873847 1875492 + Carg19668-RA Car16g00304 163456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00304 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Car16g00304 357 Pfam Zinc-binding dehydrogenase 191 314 IPR013149 -
Car16g00304 357 Pfam Alcohol dehydrogenase GroES-like domain 34 149 IPR013154 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00777 Car-Chr3:6486582 Car16g00304 Car-Chr16:1873847 1.63E-121 dispersed
Car16g00304 Car-Chr16:1873847 Car20g00941 Car-Chr20:10326946 1.86E-84 dispersed
Car11g01119 Car-Chr11:8903347 Car16g00304 Car-Chr16:1873847 3.48E-10 wgd
Car16g00304 Car-Chr16:1873847 Car04g00441 Car-Chr4:2500572 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00304 K00083 - csv:101222395 616.305