Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00318 ATGACGAGCAGTTTCGCGAATCAAAGAGGGTCCCGATCATGGGCCACTGATGAGGAGTTGCCAGCGTCTAGTGGGGTTCCGATTCCACCCAAGAAAAAATGGTCAAATGCGATGCCTCTGTTCATCGCTCTCGTGGTCATAGCAGAAATTATCTTTCTGGGTCGGCTTGATGTGGCGAAAAATGTAGCCATGGTCGATTCATGGGCCGATTTATTCTACCACTCGTCGTCTTCTCGTGCAATGATCGGTGGAGATGATGGTTTACATTCCCGGTTACTCGACGGCGATCGGATCTCGGAATTGAGGACTTGCGAGGAGTGGTTGGAGAAAGAAGACGCTGTAACGTATTCTAGGGACTTCCAAAAGAAGCCGATATTGGTTTCTGGTTTTGATGAGGGGAGGCAATCTTGTGCCGTAGGATGTGAATTTGAGGTCCATCCAAGTAAAGATTGGGATGCTGCTTTTGGTTTAAATCGTCAGAGTGGAAAGCCTTCAATTATTCGATCCATGGAATCATCTCTATATTATCCAGATAACAATATTGCCCAGGCACGACGGAATGGATATAGTATAGTAATGACCACCAGTCTCTCATCAGATGTACCTGTTGGATACTTCTCCTGGGCCGAGTATGATATCATGGCACCAGTGCAGGCTAAGACTGAGAATGCCCTTGCAGCTGCTTTCATTTCAAATTGTGATGCTCGTAACTTCCGCTTGGAAGCTCTTGTGGCTCTTGAAAAACTGAACGTCACAATCGATTCATATGGTGCTTGCCACAGAAATCGTGATGGAAGCACAGTGAACAAACTAGAGACTCTAAAGCACTACAGGTTCAGCTTGGCTTTTGAGAATTCCAACGAGGAAGATTATGTGACTGAAAAATATTTCCAATCTCTAGTTGCTGGAGCCGTTCCAGTGGTTATTGGAGCTCCAAACATTCAAGAGTTTGCTCCTTCACCTGCTTCGCTTTTGCATATCAGGAAGCTTTCAGATGTTGAGTCAGTTGCCAACTCTATGAAATACCTTGCTGCAAACCCTGAGGCATTCAACAACTCATTGAGGTGGAAATATGAGGGTCCATCTGACTCTTTCAAGGCACTATTGGATATGGCAGCAGTTCATTCGTCATGTCGCCTTTGCATTCATTTGGCAACTAGTATTCATGAGACAGAAGAAAAGGGTCTAGCGTTTAAAAATCGACCCTGTAAATGCACCAGAGGTCCGGAGACCGTTTATCACTTATATGTGAGGGAAAGAGGAAGGTTTGATTCAGAGTCCATTTTCTTGAGGTCTAGTAATCTGACGGTTGAAGGGCTGGCGTCAGCAGTGGTTTCGAAGTTCAAATCGCTGAAGCACGAACCGATTTGGAAGCAGGAGAGGCCTAAGAGCTTAAAAGGAGGGGACGAATTAAGGTTGTATAAGATATACCCAGTTGGGTTGACACAGAGGCAAGCTTTATATACCTTCAAATTTCAGGGGGACTCTGATCTCAGAAGACACGTGGAAGATAACCCGTGTGCCAAATTTGAAGCCATTTTTCTCTTGATGGGAACAGGGATATCAGCAAGCTACCAGAGCATTAGCGACATCGATGGCGATTTGGATTCTTGTCTGCCAACTTAG 1626 45.33 MTSSFANQRGSRSWATDEELPASSGVPIPPKKKWSNAMPLFIALVVIAEIIFLGRLDVAKNVAMVDSWADLFYHSSSSRAMIGGDDGLHSRLLDGDRISELRTCEEWLEKEDAVTYSRDFQKKPILVSGFDEGRQSCAVGCEFEVHPSKDWDAAFGLNRQSGKPSIIRSMESSLYYPDNNIAQARRNGYSIVMTTSLSSDVPVGYFSWAEYDIMAPVQAKTENALAAAFISNCDARNFRLEALVALEKLNVTIDSYGACHRNRDGSTVNKLETLKHYRFSLAFENSNEEDYVTEKYFQSLVAGAVPVVIGAPNIQEFAPSPASLLHIRKLSDVESVANSMKYLAANPEAFNNSLRWKYEGPSDSFKALLDMAAVHSSCRLCIHLATSIHETEEKGLAFKNRPCKCTRGPETVYHLYVRERGRFDSESIFLRSSNLTVEGLASAVVSKFKSLKHEPIWKQERPKSLKGGDELRLYKIYPVGLTQRQALYTFKFQGDSDLRRHVEDNPCAKFEAIFLLMGTGISASYQSISDIDGDLDSCLPT 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1954005 1963593 - Carg11285-RA Car16g00318 163470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00318 541 MobiDBLite consensus disorder prediction 1 28 - -
Car16g00318 541 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 222 389 IPR001503 GO:0006486|GO:0008417|GO:0016020
Car16g00318 541 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02390 Car-Chr4:19135058 Car16g00318 Car-Chr16:1954005 6.92E-16 dispersed
Car15g00517 Car-Chr15:2801214 Car16g00318 Car-Chr16:1954005 6.30E-15 dispersed
Car16g00318 Car-Chr16:1954005 Car19g00455 Car-Chr19:6263774 0 wgd
Car16g00318 Car-Chr16:1954005 Car04g00457 Car-Chr4:2592261 9.57E-16 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00318 K00753 - csv:101202837 885.945