Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00342 ATGATGAGAGTTTTCATTAGTTTTCTCCTCTGTTTACTCTCTGTAACTTGTGCAGCCACTCCAATCACCAACCCCATTTGCCCATTGGACCTTAACTATGTCCTTAGAATCCCATGGACCGCCACCGATTGCCGGAACCCCTTCTTCCAGACCACTGCCAAATCTGCCATGAATGATACCTCCAAGTTCCATTGTTGTCAAACCCTCTTGTCCTTGTTTGGAATCGCTTTGGCCCAACACCTCAAACAAACCTCTCATTTCAACCTCCCAGACCTCGCAACCTCCAATTCTTGCCTTCTTGATTACCAGTCCAAACTCTCCTCTCTCTCCCTTCCTGCCAACCTTGTTTCCCATTGCTTTGATCCCTTACAATTTGTGATATCAGCTAATGTCTGTGCTGGTATTCAAACCACGCGAGATTGGGTTTCAAAACTTGGCCAGAACTCGCCTCTTGATTCTGGGTGTCGGTCGAATCTTGTTGGTTCTGGTTGTGATGCTTGTGTGGCTGCTGGTTTCAAAGTTCAAGCTATTTTGACAGGAATTGATGGTAATAAATCTCATTCCATGGATTGCTTTTACTTTGCCGTTCTTTATGCTGCTGCCATTGTGAATGAATCTGGCCCTGAAGGCGACAGTGCTTTAGATTGCATTTTTAATCTTCAATTGAGTACTCAAAAGGGTTCAAAAAGTAAGCATTCTTCTCTAGTTTATGGCCTTACTGCTGCTGCTGTAGGACTTTTAGTCGTTTTTGTTCTATTGGGAATAGGATTTTGGTTGTACAAAAGCAAACGATTGGCTAAGAAGTCTAGCTTGGCGCTGGATGAACAAGGGCATAATGGAGAGATTTGTTGCGGTTGGAATTTTGTGTTCTCATGTGATGGTGGCTTTGAGGCCTACCATTATGGATGCTCTGAAAAT 918 43.79 MMRVFISFLLCLLSVTCAATPITNPICPLDLNYVLRIPWTATDCRNPFFQTTAKSAMNDTSKFHCCQTLLSLFGIALAQHLKQTSHFNLPDLATSNSCLLDYQSKLSSLSLPANLVSHCFDPLQFVISANVCAGIQTTRDWVSKLGQNSPLDSGCRSNLVGSGCDACVAAGFKVQAILTGIDGNKSHSMDCFYFAVLYAAAIVNESGPEGDSALDCIFNLQLSTQKGSKSKHSSLVYGLTAAAVGLLVVFVLLGIGFWLYKSKRLAKKSSLALDEQGHNGEICCGWNFVFSCDGGFEAYHYGCSEN 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2094346 2096123 + Carg11309-RA Car16g00342 163494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00342 306 Pfam SPARK 24 192 IPR043891 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00342 Car-Chr16:2094346 Car04g01145 Car-Chr4:6592258 2.04E-45 dispersed
Car16g00342 Car-Chr16:2094346 Car04g00497 Car-Chr4:2797613 2.47E-96 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00342 - - bhj:120088261 440.654