Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00352 ATGGGCAAAATACCATGTTCTTTTTGCCGGAGCAGTAGTCGTCGCCGCCCTAAGAAGGCGGCTCAGTCGTTACTGTCCCCATTGCCTCAGCCACCTTCGCAGACTGGCGTCTGCTCTCCTCCCATTAACAATAATGGCAGCGGCTTGGTCGGTAGTGGTGGTGGTGGGGCCATGGGAAAGGTGAAGAAGAAGGCTGGAGGAGCTAGGCTGTGGATGCGTCTTGACAGGTGGGGGCAAACGGAGCTTATAGAGTGGGACAAGAGCGCCATAATCCGGCGTGCTGCAATTCCGGCCAGGGATTTGAGGATTCTTGGTCCTGTTTTCTCACAATCCTCTAACATACTCGCCAGGGAAAAGGCCATGGTCGTTAGTTTAGAATTCATAAAAGCTATAGTTACTGCTGAAGAAGTTCTACTACTTGACCCTCTTAGCCAAGAGGTTATTCCATTTGTGGATAAGCTAAGGAAGCTACTTGCTAAGATGAGTTCATCTCAAGTTGAAAATGATGTTAATGTTTCGAGAGGAGGAAAGCGGTTGCCAGTTTCCGAAGCTGTTGATGAGCAGTATGAGCTGCCATTCGAGTTTCAAGTTCTTGAAATTGCATTGGAGGTTGTTTGCATATACTTAGATTCCACCGTGAAAGACCTTGAGAGAGATGCTTATCCAGTCCTGGACGAACTGGCTATGAATGTCAGCACCAAGAATCTAGAACGTGTGAGGAGCTTGAAAAGTAATCTTACTCGTATTCTTGCACGCGTTCAGAAGGTGCGGGACGAGATAGAACATCTATTAGATGACAACGAAGATATGGGACAACTATATTTGACAAGAAAATGGATACAGAATCAGCAGTCCGATGCTTCGCTGGGAGTAGTCGCTTCCAACAGCACCACTGCCACCGTTCCTCATCTGCGTCGACTTAGTTCCACCAGGAGCGGAAGTGCAGTAACCAGCAATCTTTCGGATGATAACGACGTAGAGGATCTGGAAATGTTGCTCGAGGCATACTTTATGCAGTTGGATGGGACTCGTAACAGGATATTATCGGTTAGGGAATACATCGACGACACCGAGGATTACGTCAACATTCAACTTGACAGTCAAAGAAACGAACTCATTCAGTTTCAGTTGACACTGACCATTGCTTCATTTGCCATAGCTGTCGAAACCTTAATCGCCGGGTTGTTTGGTATGAACATCCCTTGTATATTGTACGAGACGAACGGGATATTCGAGTACTTTGTCGGAGGTGCTTCAGCAGGGTGTTTGTTGATTTTCCTGCTTATTTTTGGGTATGCAAGATGGAAAAAGCTTCTTGGTTCGTGA 1326 46.68 MGKIPCSFCRSSSRRRPKKAAQSLLSPLPQPPSQTGVCSPPINNNGSGLVGSGGGGAMGKVKKKAGGARLWMRLDRWGQTELIEWDKSAIIRRAAIPARDLRILGPVFSQSSNILAREKAMVVSLEFIKAIVTAEEVLLLDPLSQEVIPFVDKLRKLLAKMSSSQVENDVNVSRGGKRLPVSEAVDEQYELPFEFQVLEIALEVVCIYLDSTVKDLERDAYPVLDELAMNVSTKNLERVRSLKSNLTRILARVQKVRDEIEHLLDDNEDMGQLYLTRKWIQNQQSDASLGVVASNSTTATVPHLRRLSSTRSGSAVTSNLSDDNDVEDLEMLLEAYFMQLDGTRNRILSVREYIDDTEDYVNIQLDSQRNELIQFQLTLTIASFAIAVETLIAGLFGMNIPCILYETNGIFEYFVGGASAGCLLIFLLIFGYARWKKLLGS 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2177250 2180984 + Carg11319-RA Car16g00352 163504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00352 441 MobiDBLite consensus disorder prediction 11 38 - -
Car16g00352 441 Pfam CorA-like Mg2+ transporter protein 243 432 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Car16g00352 441 Coils Coil 239 266 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00352 Car-Chr16:2177250 Car17g00166 Car-Chr17:1027434 3.76E-107 dispersed
Car16g00352 Car-Chr16:2177250 Car04g00508 Car-Chr4:2876870 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00352 K16075 - csv:101203496 680.248