Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00361 ATGGGTTCCGTTTGTTGTAAGCCTTCTGCTATTGAAGATAGCAAGGAAAGTCCAAGGGAGAGGCTGTCAAGTAAGACCTCGTCTGACCTGCGTGTGGCGAGAGTGACTTCATCGACAAGGGAAGAAGTGTATCGATCTAAAGATCAGCACGATGGTAATGATGCAAGAGTGATGTTGATTGACAAGCAGGTTAATGGGTCGGGCCGAATGCAGGGTGAGAATTTTGAGAGGAAGAGGGAGAAGATGGAGCATATGGGTGCTCAACATCCTTCAATGGGTAGAATTCCGAAGGCAGCTGAGGGAGACCACGTTGCTGCAGGGTGGCCTCCATGGCTGGCTGCAGTTGCTGGAGAGGCAATCAGAGGCTGGCTACCCCGACGAGCTGATTCTTTCGAGAAATTGGATAAAATTGGCCAAGGAACTTATAGTAATGTATATAGGGCTCGTGACCTTGACCAAAAGAAAATCGTTGCTTTGAAGAAAGTAAGGTTCGACAACTTAGAACCCGAGAGCGTCCGCTTTATGGCGAGGGAAATTCACATATTGCGTAGACTCGATCATCCAAATGTAATAAAGCTGGAGGGTCTAGTCACATCAAGGATGTCTTGCAGCCTTTATCTTGTTTTCGAGTACATGGAACATGACTTGGCAGGACTTGCTTCACACCCTGGCGTGAAGTTTACAGAGGCGCAGGTCAAGTGTTACATGCAGCAACTTTTACGGGGACTCGATCATTGTCACAGTCGTGGAGTTCTACATCGTGACATAAAGGGCTCGAACCTTTTAATTGACAACAATGGCATCTTGAAAATTGCTGACTTTGGTCTAGCAAGTCTTTTTGATATCCACCAAAATCAGCCACTGACAAGTCGGGTCGTGACTCTTTGGTATCGACCGCCTGAGCTTTTACTTGGCGCTACTTATTATGGTATAGCTGTAGATTTATGGAGTACTGGCTGCATACTTGCTGAATTGTATGCTGGGAAGCCCATTATGCCAGGAAGAACAGAGGTGGAACAGCTACATAAAATATTTAAACTCTGCGGCTCTCCTTCAGAGGATTATTGGAGAAAATCAAGGTTGCCACATGCAACCATATTTAAGCCCCAACAGCCCTATCGACGTTGTGTTGCAGACACGTTTAAGGATTTCCCTGCACCAGCTTTAGCTCTCATTGAGACGTTACTCTCGGTAGATCCTGCTGATCGTGGCTCTGCTGCTCTTGCCCTTAAAAGTGAATTCTTTTCAACAAAGCCTCTTCCTTGTGATTCTTCAAGCTTGCCAAAGTATCCTCCCAGCAAAGAATTGGATGCCAAGATAAGGGATGAGGAAGCTAGAAGACAAGGAGCAGTAGGAAGCAAGGGACACCGACTTGACCTGCAAAGGAAAAATGGCGAGTCTCGAGCCGTCCCTGCACCTGATGCCAATGCCGAGTTAGCCTCATCAATGCAGAAACGACAAGGTCAGTTCAATTCGAAGAGCCGGAGTGAGAAGTTTAACCCACATCTAGAAGAAGCGTCGGGTTTTCCTATCGATCCACCTAGACCTTCACAAGGAGCAGAAAGAATGGATTCTCATGTGCGTCATCCTAAGAAAGCCTCACATTCAGGGCCACTTGCTCAGCGGGCTGCTTGGGCAAAGGCTAGTAAGAACTCCGATGACGCTCCCAAAATGTCAACCGGGGCCGAAACGTTCGCAACTTCAGGACTAGTTGCAGCTAGAAGAAGTATGTTGGCTGAAGATTGCAGGGAAAAGCCCGACTCTTCACAAGGAGAGGTTAAAAAACTAATTGGCAGGTTTCCCGGTTCCTTCAAAGAAACCTCGGAGTCGTCGATGCTACCGGGCCAGAAGTTCTCAAATCACAGTATTGTAGGCTCACATGACAAAGAGAGAAGCAGCACCAAAGACTCTATAGTTGTGGGTTATGGCTCAAACGGTCATAAGATTCACTACTCTGGTCCATTACTGGTTCCCTCAAGCAACATGGACCAAATGTTTAAGGACCACGATCGCCATATCCAAGAAGCAGTAAGACGAGCTCGGCTCGACAAGGCAAAGGCACGGAAGATTCAAGCGGACGGGAAACAGATGTCAGCCAATTCATTATTCGTCTCCGGTCATTAA 2124 47.22 MGSVCCKPSAIEDSKESPRERLSSKTSSDLRVARVTSSTREEVYRSKDQHDGNDARVMLIDKQVNGSGRMQGENFERKREKMEHMGAQHPSMGRIPKAAEGDHVAAGWPPWLAAVAGEAIRGWLPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGVKFTEAQVKCYMQQLLRGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASLFDIHQNQPLTSRVVTLWYRPPELLLGATYYGIAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSRLPHATIFKPQQPYRRCVADTFKDFPAPALALIETLLSVDPADRGSAALALKSEFFSTKPLPCDSSSLPKYPPSKELDAKIRDEEARRQGAVGSKGHRLDLQRKNGESRAVPAPDANAELASSMQKRQGQFNSKSRSEKFNPHLEEASGFPIDPPRPSQGAERMDSHVRHPKKASHSGPLAQRAAWAKASKNSDDAPKMSTGAETFATSGLVAARRSMLAEDCREKPDSSQGEVKKLIGRFPGSFKETSESSMLPGQKFSNHSIVGSHDKERSSTKDSIVVGYGSNGHKIHYSGPLLVPSSNMDQMFKDHDRHIQEAVRRARLDKAKARKIQADGKQMSANSLFVSGH 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2244419 2249441 + Carg11328-RA Car16g00361 163513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00361 707 Pfam Protein kinase domain 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car16g00361 707 MobiDBLite consensus disorder prediction 1 52 - -
Car16g00361 707 MobiDBLite consensus disorder prediction 605 622 - -
Car16g00361 707 MobiDBLite consensus disorder prediction 445 562 - -
Car16g00361 707 MobiDBLite consensus disorder prediction 12 27 - -
Car16g00361 707 MobiDBLite consensus disorder prediction 445 464 - -
Car16g00361 707 MobiDBLite consensus disorder prediction 605 635 - -
Car16g00361 707 MobiDBLite consensus disorder prediction 35 52 - -
Car16g00361 707 ProSitePatterns Protein kinases ATP-binding region signature. 137 160 IPR017441 GO:0005524
Car16g00361 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Car16g00361 707 ProSiteProfiles Protein kinase domain profile. 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car16g00361 707 MobiDBLite consensus disorder prediction 480 496 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g00518 Car16g00361 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00746 Car-Chr1:4527449 Car16g00361 Car-Chr16:2244419 0 dispersed
Car06g00743 Car-Chr6:5090310 Car16g00361 Car-Chr16:2244419 0 dispersed
Car12g01072 Car-Chr12:10502659 Car16g00361 Car-Chr16:2244419 0 dispersed
Car14g01474 Car-Chr14:12256152 Car16g00361 Car-Chr16:2244419 0 dispersed
Car16g00361 Car-Chr16:2244419 Car20g00175 Car-Chr20:952919 7.68E-19 dispersed
Car07g00759 Car-Chr7:3937572 Car16g00361 Car-Chr16:2244419 1.58E-145 transposed
Car09g01082 Car-Chr9:10127893 Car16g00361 Car-Chr16:2244419 7.14E-128 transposed
Car16g00361 Car-Chr16:2244419 Car04g00518 Car-Chr4:2917917 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89432 PF00069 Pkinase 2.90E-68 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00361 - - csv:101222182 1330.47