Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00380 ATGAGTCCAGCAAGTTGTTTTTGGACAATATTCAATCAACGGAAGGTGAAACATGTTTCAAGCAATGGAGAACAGGTACACGTAAAGACAGGAAAATCCAATGGTTCCCCTAATGGGAAGAGTGAAGATTTAGCTGCAACTCGAATTCAAAATGCATTTCGCTCATTTACGGCCAGAAAGATTGTACATGATTCGAAAGGGCCAGAGAGGTGCCAGGTTCTAATTCAAGGTGAAACGGCTACAAAACATGTGTTAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAACACGTAGACTCTGTATGGTCACAGAATATCGAATCAAACAAAAGAAACAGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAAGTAGAATGGTGTGGTGGATCTGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCATCGAGAAGAAGCTGCTGTGAGAAGGGAGCGTGCTATGGCGTATGCATTCTCTCATCAGTGGAGGGCCAATTCCATCTTAGATCTAAATCCGGCTTCATACAGCCTTGACAAAGAGAACTGGGGTTGGAGCTGGAAGGAGAGGTGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACACATCCCACCATTCCAAAGAAGGTGCAGACGAAGCAAAGAAGCAAACTCAATGAAATAACATATCAACCGGGGTCTAAGGTCTCAACCTCAGCCAATCATTCTTTGTCAAACAAGGGGAGTTCAAAGGCTAGAAATTCATATATGCCCAAATGA 780 42.82 MSPASCFWTIFNQRKVKHVSSNGEQVHVKTGKSNGSPNGKSEDLAATRIQNAFRSFTARKIVHDSKGPERCQVLIQGETATKHVLSFIHSWSRMQQEIRTRRLCMVTEYRIKQKKQENQLKLEAKIHELEVEWCGGSETKEEILFKIQHREEAAVRRERAMAYAFSHQWRANSILDLNPASYSLDKENWGWSWKERWIAARPWEIRANTHPTIPKKVQTKQRSKLNEITYQPGSKVSTSANHSLSNKGSSKARNSYMPK 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2341810 2346383 + Carg11347-RA Car16g00380 163532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00380 259 MobiDBLite consensus disorder prediction 212 259 - -
Car16g00380 259 MobiDBLite consensus disorder prediction 211 259 - -
Car16g00380 259 Coils Coil 112 132 - -
Car16g00380 259 MobiDBLite consensus disorder prediction 21 41 - -
Car16g00380 259 ProSiteProfiles IQ motif profile. 42 70 IPR000048 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00168 Car-Chr7:990818 Car16g00380 Car-Chr16:2341810 2.16E-70 dispersed
Car16g00380 Car-Chr16:2341810 Car04g02506 Car-Chr4:19885272 7.11E-33 dispersed
Car16g00380 Car-Chr16:2341810 Car11g00811 Car-Chr11:4806138 6.30E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00380 - - csv:101206595 434.491