Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00394 ATGACGTCGGGGACGAGGCTACCAACATGGAGGGAGCGGGAGAACAACAAGAGAAGGGAGAGAAGGAGAAGAGCTATCGCAGCAAAGATCTTTGCTGGACTCAGGATGTATGGGAACTACAAGCTTCCCAAACATTGCGACAACAATGAGGTCCTTAAAGCGCTCTGCAATGAGGCGGGATGGACCGTCGAACCTGATGGTACCACTTACCGTAAGGGATGCAAGCCAATTGAACGTATGGATGTGGTTGGTGGGTCGGCAGCTGCAAGCCCGTTCGCATCTCACCAACCAAGTCCTTGTGCTTCCTTCAATCCAAGCCCCGGTTCATCTTCATTTCCAAGTCCAGCATCATCCTCATATGTTGCTAATCCAAATGCCGATGGCAGTTTTCTAATCCCCTGGCTCAGGAACCTTTCATCGTCATCATCTTCAGCATCCTCATCTAAACTCCCCAATCTCCATATTCATGGAGGTTCCATCAGTGCTCCTGTTACTCCTCCTTTGAGTTCCCCAACTGCTAGAACGCCCCGACTCAAAGCTGACTGGGAAGACCAATCTGTCCTACCAGGATGGAATGCACAATACTATTCCTCCCTTCCATCTTCTACTCCACCAAGTCCTGGACGTCACGTTGTTCCCAATCCAGAATGGTTCGCTGGCCTTAGAATTCCTCAAGGTGGACCCAATTCTCCAACATTTAGTCTTGTTTCTACAAACCCATTTGGTTTCAAGGAAGCAGCAACGACTGGTGGAGGTTCTCGCATGTGGACCCCTGGTCAAAGTGGGACCTGCTCTCCTGCCATTGCCGCAGGCTCCGATCACACTGCAGATATTCCAATGTCAGAAGTGATCTCTGAAGAGTTCGCATTTGGAAGCAACACAGCAGGAATAGTGAAGCCATGGGAAGGAGAACGAATTCACGAGGAGTGTGGCTCAGATGACCTAGAGCTATCTCTTGGGAACTCAAGAACCAGATAA 978 49.9 MTSGTRLPTWRERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPIERMDVVGGSAAASPFASHQPSPCASFNPSPGSSSFPSPASSSYVANPNADGSFLIPWLRNLSSSSSSASSSKLPNLHIHGGSISAPVTPPLSSPTARTPRLKADWEDQSVLPGWNAQYYSSLPSSTPPSPGRHVVPNPEWFAGLRIPQGGPNSPTFSLVSTNPFGFKEAATTGGGSRMWTPGQSGTCSPAIAAGSDHTADIPMSEVISEEFAFGSNTAGIVKPWEGERIHEECGSDDLELSLGNSRTR 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2419196 2422554 - Carg11361-RA Car16g00394 163546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00394 325 MobiDBLite consensus disorder prediction 91 118 - -
Car16g00394 325 MobiDBLite consensus disorder prediction 1 20 - -
Car16g00394 325 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 325 IPR033264 GO:0003700|GO:0006351|GO:0009742
Car16g00394 325 MobiDBLite consensus disorder prediction 88 118 - -
Car16g00394 325 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 139 IPR008540 -
Car16g00394 325 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 325 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00463 Car-Chr13:6967221 Car16g00394 Car-Chr16:2419196 4.95E-127 dispersed
Car16g00394 Car-Chr16:2419196 Car18g00409 Car-Chr18:2553612 1.17E-114 dispersed
Car16g00394 Car-Chr16:2419196 Car04g00615 Car-Chr4:3523205 3.09E-179 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4922 PF05687 BES1_N 1.10E-64 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00394 - - csv:101210002 575.859