Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00420 ATGAGGCAAGAAAGGTGTATGGCAGTAGAAGTCAACCAAACAATAGAAAATAACCCCTTCTCTTCTTTCCCTCTCAGTTTACAATTAGGTCAACCAAACAGAAACAGCTTCACTTCCACCACCACCGACCGCACCTTCGCCTCCTCCAGCGCCCGCACCAGCCTTGCCAGGAGCAGCCTAACTCTCAGCTTTAATGAATCTCGCCTCGCCGCCGCTGCCGCCGCCGCTGCCGCTGTTAACCACCGTCCCCACCACCACTCTGACCCTCACTGGTCCGCTATCAAAGCCGCCACTGCACTCTCATCCGACGGCCGTCTCCATCTCCGCAACCTGAAACTCGTCCGCCACCTCGGCACCGGCAACCTCGGCCGCGTCTTCCTCTGCCATTTGAGAGACAACGATCATGCCAGTTTTGCCCTCAAGGTCGTTGATAAGGACGCACTCAGTAACAAGAAGCTGTTGCAGGTCCAAACGGAATCCGAGATTCTCGCTTCTCTGAATCATCCTTTTCTTCCCACTCTCTACGCGCGTCTCGACGTCTCTCACTACACGTGCCTCCTTATTGACTACTGCCCCGCCGGCGATCTTCACTCTCTCCTCCGCAAACAGCCTAGTTATCGCTTCTCCGTCGCGGCGGCTAGATTCTTCGCTGCCGAGGTTTTGGTGGCGCTCGAGTACCTTCACGCGCTTGGGATCGTGTACCGCGATCTCAAGCCTGAGAACGTTCTTTTGCGTGAGGATGGCCACGTCATGCTCTCTGATTTCGACTTGTGTTTTAAGTCCGAAGTGGTCCCCACTTTTCATACGTGGACTCAGCCGGGACCACAGAGTACTAGCTGCTTTGGATGGAGGACGGCGGCTGCGGAATCGCAGGAGATTGTCGGGGAGTTTGTGGCGGAGCCGACGACAGCGTTTTCTAAATCGTGCGTGGGGACTCATGAGTACTTAGCGCCAGAGTTGGTGACCGGCGGTGGTCACGGCAACGGCGTTGACTGGTGGGCGTTTGGGGTGTTTGTTTACGAGCTGCTACACGGGACGACGCCGTTTAAGGGAGTGAACAAAGAGGGTACATTAAGGAACATAGCGTCGTCGGAGGGGGTGAAGTTCCGGGCGGCAGTGGAGGAAGAGGGGATGGCGGAGGCGAGAGATCTGATAGAGAGGCTGCTGGTGAAAGATCCAGCAAGGCGGTTGGGTTCCGGAAAAGGGGCGACGGAGGTCAAACGGCATCCGTTCTTCGACGGGATAAAGTGGCCGTTGATCAGGACGTATCGGGCGCCGGAGGTGTATGGGCTGACGAGAAAAGCCAGATCCCACGTGAGCCACGTGACTGGAGTCAGCCACCGCATGCGGCGGCGGACATGGTGGAACTGGAGGAAGCTCAGTAATGGTTTATTTAAAAATGGAAATGCCAGTAAATCTCATACCAATAACAATTATTATAGTTATAGCTCAAAATATTAG 1461 55.17 MRQERCMAVEVNQTIENNPFSSFPLSLQLGQPNRNSFTSTTTDRTFASSSARTSLARSSLTLSFNESRLAAAAAAAAAVNHRPHHHSDPHWSAIKAATALSSDGRLHLRNLKLVRHLGTGNLGRVFLCHLRDNDHASFALKVVDKDALSNKKLLQVQTESEILASLNHPFLPTLYARLDVSHYTCLLIDYCPAGDLHSLLRKQPSYRFSVAAARFFAAEVLVALEYLHALGIVYRDLKPENVLLREDGHVMLSDFDLCFKSEVVPTFHTWTQPGPQSTSCFGWRTAAAESQEIVGEFVAEPTTAFSKSCVGTHEYLAPELVTGGGHGNGVDWWAFGVFVYELLHGTTPFKGVNKEGTLRNIASSEGVKFRAAVEEEGMAEARDLIERLLVKDPARRLGSGKGATEVKRHPFFDGIKWPLIRTYRAPEVYGLTRKARSHVSHVTGVSHRMRRRTWWNWRKLSNGLFKNGNASKSHTNNNYYSYSSKY 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2621183 2622851 - Carg11387-RA Car16g00420 163572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00420 486 ProSiteProfiles Protein kinase domain profile. 111 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car16g00420 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Car16g00420 486 Pfam Protein kinase domain 113 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g00596 Car16g00420 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00420 Car-Chr16:2621183 Car18g00579 Car-Chr18:6510796 8.49E-113 dispersed
Car16g00420 Car-Chr16:2621183 Car04g00596 Car-Chr4:3400951 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89435 PF00069 Pkinase 2.90E-54 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00420 - - bhj:120087146 764.992