Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00424 ATGGAGCTTGTCATGATGCAAACCTGCTGCATTGCTAATTGCATAATGGCTGCCATTTGTGACGATTTGAAGGAGCGGAGAACGGCTGCTGCTGCTGCTGCTGCTTTATCATATAGATATGACTTGCTTCCCTTTTTTGTTCAAGTTTCTTGTGTTGAAAGATGTGAGGAAGTTCTAACATTATTTTTCTATGGAATAGAACTGTCGGGCATTCAAAATGTTAGATTTTACACTTACAAAGAGCTGAAAGTTGCGACCGACGATTTCAGCTTGGCGAATAAAATAGGGGAGGGTGGTTTTGGCTCCGTCTACAAGCTGATGCGTTTTAAAAGCCTTGAGGGAAAGCCCGAAAGGGAATGCCCAAAGAGGATAATATCGGCTAGTGGTGAGCTTAGGCTCTTACAAATGGGAAAGCTAAAAGATGGAAAGATTGCTGCCATAAAAGTTCTTTCAGCTGAATCAAAACAAGGATTGAAGGAATTCTTGACAGAAATCAATGTCATCTCTGTGATAGAACATGAAAATCTGGTTCAGCTTTATGGCTGCTGTGTGGATGATAATCATAGAATCCTTGTCTACAACTACCTCGAGAATAATAGCCTTGCACAAACTCTTCTCGGGCGAGGTCACAGTAGCATCCAGTTTAATTGGCGAACGAGGTCCAAGATTTGCATTGGAATTGCACGTGGGCTCGCGTTCCTTCACGAGGATGTACAGCCACATATCATTCATAGAGATATCAAAGCCAGCAACATTCTTCTCGACCGCGACCTCACTCCTAAAATTTCAGATTTCGGCCTCGCAAAGCTTATTCCAGCCAGCATGACTCATGTCAGTACACGAGTGGCAGGAACAATTGGTTACCTAGCTCCAGAATATGCCATCAGAGGACAGGTGACAAGAAAATCGGATCTTTACAGTTTCGGCGTCCTCCTCGTGGAGATCGTCAGCGGGAGATGCAACACGAATACACAACTACCAATGGGAGAACAATATCTTCTTGAAAGGACATGGCATCATTACGAGCAAGGAGAGCTCGTTCTACTTGTAGATGTGTCCTTAAATGGCGACTTCGATGCCGAGGAGGCTTGTAGATATCTAAAGATTGGTCTACTTTGCACTCAAGACAGTCCAAAGCTCCGTCCATCGATGTCGACTGTGGTAAAGATGCTAACGGGCGAGATGAGTATCGAAGATAGAAAGATAACGAAACCGGGGCTGATTTTGGACTTCATGGATCTAAAAGTAAGGGATCAACAGCAAAAGAAGGGGAATAAAGAAGGATTGTCTTCTGATAGTCTGTCTTCTGGATCGTCAACTGTTACAACTGCAACCTTCAGTGCACAATATGACAGGAACACCTTCTCATCTGTGCTGTGA 1380 43.91 MELVMMQTCCIANCIMAAICDDLKERRTAAAAAAALSYRYDLLPFFVQVSCVERCEEVLTLFFYGIELSGIQNVRFYTYKELKVATDDFSLANKIGEGGFGSVYKLMRFKSLEGKPERECPKRIISASGELRLLQMGKLKDGKIAAIKVLSAESKQGLKEFLTEINVISVIEHENLVQLYGCCVDDNHRILVYNYLENNSLAQTLLGRGHSSIQFNWRTRSKICIGIARGLAFLHEDVQPHIIHRDIKASNILLDRDLTPKISDFGLAKLIPASMTHVSTRVAGTIGYLAPEYAIRGQVTRKSDLYSFGVLLVEIVSGRCNTNTQLPMGEQYLLERTWHHYEQGELVLLVDVSLNGDFDAEEACRYLKIGLLCTQDSPKLRPSMSTVVKMLTGEMSIEDRKITKPGLILDFMDLKVRDQQQKKGNKEGLSSDSLSSGSSTVTTATFSAQYDRNTFSSVL 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2649297 2652626 - Carg11391-RA Car16g00424 163576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00424 459 ProSiteProfiles Protein kinase domain profile. 89 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car16g00424 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Car16g00424 459 Pfam Protein tyrosine and serine/threonine kinase 92 390 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g00590 Car16g00424 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00461 Car-Chr13:6946609 Car16g00424 Car-Chr16:2649297 6.35E-97 dispersed
Car16g00424 Car-Chr16:2649297 Car18g00715 Car-Chr18:8355334 4.21E-85 dispersed
Car04g00541 Car-Chr4:3040251 Car16g00424 Car-Chr16:2649297 9.45E-138 transposed
Car07g00915 Car-Chr7:5071651 Car16g00424 Car-Chr16:2649297 1.06E-123 transposed
Car14g00054 Car-Chr14:307780 Car16g00424 Car-Chr16:2649297 5.07E-91 transposed
Car18g00337 Car-Chr18:2076658 Car16g00424 Car-Chr16:2649297 6.32E-15 transposed
Car16g00424 Car-Chr16:2649297 Car04g00590 Car-Chr4:3365743 3.34E-168 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89436 PF07714 PK_Tyr_Ser-Thr 5.90E-41 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00424 - - csv:101216433 613.994