Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00453 ATGTTCTGTTTCGCCGCCGTCATCGCCGCCTTCTTTCTTCTTCTTCTTCATTTTCTTTTCAAATTCTCCGCCCCTGCTCGCCGGAAACTTCCCCTTCCGCCGGGCTCAATGGGCTGGCCTTACATGGGTGAAACCCTCCAACTCTACTCGCAAGATCCCAATGTCTTCTTCGCCTCAAAGAAGAAGAGATATGGTCCTATTTTCAAGTCCCACATATTGGGTTATCCTTGTGTGATGGTTTCTAGCCCTGAAGCTGCTAAGTTTGTGTTGGTCACTAAAGCTCATCTCTTTAAGCCTACATTTCCAGCCAGTAAAGAAAGGATGTTGGGCAAAAATGCCATCTTCTTTCACCAAGGTGACTACCATGCTAAATTACGACGCCTCGTTCTTCGAACATTCATGCCTGAAGCGATTCGAAACATCGTCCCGAGTATCGAATCCATTGCTAAGAACACTGTTCAATCATGGGATGGACAATTGATCAATACCTTCCAAGAAATGAAGATGTTTGCATTCGAGGTTTCTTTACTTTCGATATTTGGAAAAGAAGAAGCTCTTTACTTCGAAGACTTGAAGCGATGCTATTACACACTTGAAAAAGGGTACAATTCAATGCCGATAAACCTGCCAGGAACACTCTTCCACAAGGCCATGAAAGCAAGAAAAGAGCTAGCACATATCTTAACCAAGATCCTCTCAACCAGAAGGGAAATGAAGCGCGATCACAACGATCTCCTTGGATCTTTCATGGGTGAAAAGGAAGGCCTCACCGATGAACAGATCGCCGATAACGTCATCGGTCTAATCTTCGCTGCTCGGGATACGACCGCGAGTGTTCTAACATGGATCTTGAAGTATCTAGGAGAAAACCCAAGTGTTCTTCAAGCTGTCACTGATGAACAAGAAGCAATCATGAAGGAAAAACAGAGTGGAGATGATAATCTCACCTGGGCTGACACCAAAAACATGCCGATCACTTCAAGGGTGATTCAAGAAACTCTAAGAGTTGCTTCAGTTCTATCATTTACCTTCAGAGAAGCAGTGGAAGATGTAGAATTTGACGGCTATTTGATTCCAAAAGGATGGAAAGTTCTTCCTCTTTTCAGAAACATTCATCACAGCCCAGAAAATTTCCCTCAACCTGACAAGTTCGATCCTTCAAGATTCGAGGTCCCTCAAAAACCCAATACCTACATGCCATTTGGCAATGGAACCCACTCTTGTCCAGGAAATGAACTGGCCAAGCTCGAAATGCTCGTTCTTCTCCATCATTTAACCACCAAGTACAGATGGAGTGTAGTGGGCGCTCAAGAAGGCATTCAATACGGTCCTTTTGCGCTTCCCCATAATGGGCTTCCCATTAAAATCTCTCTGAAGAAGTAA 1383 44.25 MFCFAAVIAAFFLLLLHFLFKFSAPARRKLPLPPGSMGWPYMGETLQLYSQDPNVFFASKKKRYGPIFKSHILGYPCVMVSSPEAAKFVLVTKAHLFKPTFPASKERMLGKNAIFFHQGDYHAKLRRLVLRTFMPEAIRNIVPSIESIAKNTVQSWDGQLINTFQEMKMFAFEVSLLSIFGKEEALYFEDLKRCYYTLEKGYNSMPINLPGTLFHKAMKARKELAHILTKILSTRREMKRDHNDLLGSFMGEKEGLTDEQIADNVIGLIFAARDTTASVLTWILKYLGENPSVLQAVTDEQEAIMKEKQSGDDNLTWADTKNMPITSRVIQETLRVASVLSFTFREAVEDVEFDGYLIPKGWKVLPLFRNIHHSPENFPQPDKFDPSRFEVPQKPNTYMPFGNGTHSCPGNELAKLEMLVLLHHLTTKYRWSVVGAQEGIQYGPFALPHNGLPIKISLKK 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2884958 2887377 + Carg11421-RA Car16g00453 163605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00453 460 PANTHER CYTOCHROME P450 26 8 457 - -
Car16g00453 460 Pfam Cytochrome P450 33 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car16g00453 460 SUPERFAMILY Cytochrome P450 27 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car16g00453 460 PANTHER ABSCISIC ACID 8'-HYDROXYLASE CYP707A2 8 457 - -
Car16g00453 460 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car16g00453 460 PRINTS E-class P450 group I signature 260 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car16g00453 460 PRINTS E-class P450 group I signature 280 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car16g00453 460 PRINTS E-class P450 group I signature 327 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car16g00453 460 PRINTS E-class P450 group I signature 367 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car16g00453 460 PRINTS E-class P450 group I signature 398 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car16g00453 460 PRINTS E-class P450 group I signature 408 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car16g00453 460 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 401 410 IPR017972 GO:0005506|GO:0016705
Car16g00453 460 PRINTS P450 superfamily signature 271 288 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car16g00453 460 PRINTS P450 superfamily signature 328 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car16g00453 460 PRINTS P450 superfamily signature 399 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car16g00453 460 PRINTS P450 superfamily signature 408 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car16g00453 460 Gene3D Cytochrome P450 23 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01434 Car-Chr1:12370923 Car16g00453 Car-Chr16:2884958 0 dispersed
Car04g02708 Car-Chr4:20966689 Car16g00453 Car-Chr16:2884958 2.15E-91 dispersed
Car05g00156 Car-Chr5:812842 Car16g00453 Car-Chr16:2884958 4.76E-111 dispersed
Car06g00793 Car-Chr6:6124164 Car16g00453 Car-Chr16:2884958 3.91E-97 dispersed
Car11g01089 Car-Chr11:8536333 Car16g00453 Car-Chr16:2884958 0 dispersed
Car15g00229 Car-Chr15:1281704 Car16g00453 Car-Chr16:2884958 2.74E-89 dispersed
Car16g00453 Car-Chr16:2884958 Car19g00458 Car-Chr19:6287688 6.72E-179 dispersed
Car19g00841 Car-Chr19:8882770 Car16g00453 Car-Chr16:2884958 4.44E-75 dispersed
Car01g00561 Car-Chr1:3303511 Car16g00453 Car-Chr16:2884958 0 transposed
Car16g00453 Car-Chr16:2884958 Car04g00561 Car-Chr4:3175630 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00453 K09843 - csv:101212508 853.203