Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00458 ATGGGAGCCAGTGGGAGTAGGTTGTCGAGTAGTTCGCCGCCGCCGCCGCCGCCGCCGCCACCGTCGGCGGCGGCGGCGAATCTCTCATGTTCTGGGAGAATCCGGAGGGGGAGATCCAAAGGCCGTAGAGTTTTCCAGTCTGCTTGCCTCGGTACCCCCTCTGGATCGCACCACAGCGACAATGACGATAATGATTGTAAAAGTGAGAACAAAAAGAATGCTCATGATTATTCATCTGCAAATCAGACTGATCAAGCTAATGATCAGATGAAAATTGAGGGTTACAGAAGGGTCAAAGCTGAGGAATCTCTTGAAATGCCTTGCGTATCATCAAATGTTGAGTTTGATGGATGGGATCAAGCAGGTGTTGCTGTTGCAGCAGCAGCTCCCAGAGCTGGAAGTACCTCTGCTCGTGTATCGTCCCTGCAATCGTTGAACCCTTCGAGTAACTTCCTTTCTCGTTTTAGTTTCATTCCTGGTAATATAAGCTTCAGACTTAGTAGAGCAAGCAGTTTAGGATCATCTAGATCTTTTCCTGTGTCTTCAACGAATCTTTCAATGTTGAACGATGATGCCGAGCTTCATTTATCAGACAGACCTGCTGGAGGCTTGGGTGCTCAAGATGAAACTCAGCAAGGTAGTGACTTGCTTCCTGCGTCGCTGGCTAGTGCAACTCGTGCTCAATGTTATGGAGATAGTCCTGCCAATTTTAGGCTAAATACACAAAATTTGAGTCTTTCTGATAACTTACAAGACAATCAGTCAGTTGGAAACCTTTCCCATGCTCAAACTCAACCTGAAAATGAAAGCAGTGAGATTAGACAATCTGACAGGCGGACTGGATCTAGGGAACCGGTTGAACGCAATTTTCGTTTCAGTCGGACCCTTAGTGTTGGAAGACTGCGTGATAGAGTTCTTCGTAGATCATCATTGTCTGATTTCACATTTTGTCCTCCACAACAAGAGGGTGAAGAGAGAGATGCAAGTTACAGTGGTGATGGTGGACATGTCTGGACTGCCGAGACGAGGGCGTTGGCATCTGTAGACAATGCTATGACCTCGCCAACAACATCGGGTTATCCAGCTTCTAGTCTATCCAGTTCGTTGTTCAGCACCCATGGTTTTGAAATGGAAACTACACGACCTAGAGAAGCTAGATATCATGATCTGCTGGAACACAGATCAAATTTCCTCGAACGGAGAAGACGAATACGGTCCCAGGTTCGTGCCTTACAGCGGTTGGGAAGTCGCTTTGAGAACCTATCTGGTCATGAGAGATCGTGCATATTATCCGGTCAACATAGAACCAGTCATTGTACTTGTCGTATCAACAATCGTGACACAAACGTAAACGATAACACAAGTGCTAGAGCCAGTATATCAAGAATTGTAATGTTAGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGTAGTTTTATCCTCCCGCCCTGCGTCTTCTTTTGGCTCTCTGCCTGCTCCCAACGCTGTTGTAGATTCTTTGCCTGTTAAATTTCATTCCAAGTTGCAAAAGCATCAAAACGAGGAAGCTGCCCAATGCTACATATGCCTGGTTGAGTACGAGGAAGGGGATAGCATGAGAGTGTTGCCTTGCCATCATGAATTTCACGCAGCATGTGTCGACAAGTGGCTGAAGGAGATCCACAGGGTGTGCCCGCTCTGTCGAGGGGACATATGCAGCAGATCTGATACGTTATCAGACGATTTTAAGTGA 1746 46.68 MGASGSRLSSSSPPPPPPPPPSAAAANLSCSGRIRRGRSKGRRVFQSACLGTPSGSHHSDNDDNDCKSENKKNAHDYSSANQTDQANDQMKIEGYRRVKAEESLEMPCVSSNVEFDGWDQAGVAVAAAAPRAGSTSARVSSLQSLNPSSNFLSRFSFIPGNISFRLSRASSLGSSRSFPVSSTNLSMLNDDAELHLSDRPAGGLGAQDETQQGSDLLPASLASATRAQCYGDSPANFRLNTQNLSLSDNLQDNQSVGNLSHAQTQPENESSEIRQSDRRTGSREPVERNFRFSRTLSVGRLRDRVLRRSSLSDFTFCPPQQEGEERDASYSGDGGHVWTAETRALASVDNAMTSPTTSGYPASSLSSSLFSTHGFEMETTRPREARYHDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHERSCILSGQHRTSHCTCRINNRDTNVNDNTSARASISRIVMLAEALFEVLDEIHQQSVVLSSRPASSFGSLPAPNAVVDSLPVKFHSKLQKHQNEEAAQCYICLVEYEEGDSMRVLPCHHEFHAACVDKWLKEIHRVCPLCRGDICSRSDTLSDDFK 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2913800 2917214 - Carg11426-RA Car16g00458 163610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00458 581 MobiDBLite consensus disorder prediction 58 74 - -
Car16g00458 581 MobiDBLite consensus disorder prediction 314 333 - -
Car16g00458 581 MobiDBLite consensus disorder prediction 271 286 - -
Car16g00458 581 Pfam Ring finger domain 523 566 IPR001841 -
Car16g00458 581 MobiDBLite consensus disorder prediction 75 89 - -
Car16g00458 581 MobiDBLite consensus disorder prediction 1 90 - -
Car16g00458 581 MobiDBLite consensus disorder prediction 10 24 - -
Car16g00458 581 MobiDBLite consensus disorder prediction 248 286 - -
Car16g00458 581 MobiDBLite consensus disorder prediction 248 270 - -
Car16g00458 581 ProSiteProfiles Zinc finger RING-type profile. 524 566 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00460 Car-Chr10:2317607 Car16g00458 Car-Chr16:2913800 3.23E-49 dispersed
Car11g00383 Car-Chr11:2118199 Car16g00458 Car-Chr16:2913800 1.44E-47 dispersed
Car15g00040 Car-Chr15:328979 Car16g00458 Car-Chr16:2913800 6.41E-13 dispersed
Car16g00458 Car-Chr16:2913800 Car06g01029 Car-Chr6:7804858 8.84E-13 dispersed
Car16g00458 Car-Chr16:2913800 Car04g00556 Car-Chr4:3146784 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00458 - - csv:101213468 916.376