Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00460 ATGGCCAGAGAAAACTTCGGTTTATGGCTATTCTTGGTTGCATCTCTGCAGTTTTTCCTTAGAACACAGTGTATTAATGTGGGGATTACTTATGTTCAAGAAGCTGGTATCAAAGGAGGCGTTTGTTTGGATGGAAGTCCTCCAGCGTATCATTTCAGCGAAGGGTTCGGCGCTGGGATCGATAATTGGTTGATACAACTCGAGGGAGGAGGATGGTGCAACAATGTCACGACCTGTCTCCAACGCAGGGACACTCGTTTAGGCTCGTCTAGGAAAATGGTTAAAGTTCTTGCGTTCTCGGGGATTTTGACCAATAAACAAAAATTCAATCCAGATTTTTATAACTGGAACAGAATCAAGGTTCGGTACTGTGATGGATCTTCTTTCACTGGAGATGTTGAAGCGGTTGATCCTGCTACCAATCTGCATTTCAGAGGAGCAAGAGTTTTTCGTGCTATCATTGATAACTTACTCGCCAAAGGAATGAAGAATGCGAAGAACGCTATTCTCTCCGGTTGTTCCGCGGGCGGATTAAGTTCGATTTTGAATTGTGATCATTTCAAATCTCTACTTCCTTCTACTACTAAAGTAAAGTGCCTCTCAGATGCTGGATACTTCATTAACGCGAAAGATGTCTCTGGCACACAGCACATCGCGGACTTCTACAGCGACGTAGTTGCTACCCATGCTTCTGCTAAGAATTTGCCTATATCATGCACATCAAAAATGAAACCAGAGATGTGTTTCTTTCCCCAAAACGTGGTTCAGCTCATTCAGACACCAATATTTCTTGTAAATGCAGCCTATGATTCATGGCAGATCAAGAACATACTGGCGCCCGGCGTTGCCGATCCGCATGGTACTTGGCACAGCTGCAAGCTCGACATCAAGAACTGCTCGCCTATTCAGCTACGAACCATGCAAGATTTCAGGGTTCAGTTCTTGAGTGCATTGAATGGCGTTGGAAGTTCTTTATCTAGAGGATTGTTCATAGATTCTTGCTATGCTCATTGCCAAACCGAAACGCAGGAGACATGGCTACGAGCAGACTCTCCCACGCTGAGTAAGACGACCATTGCAAAGGCAGTTGGAGACTGGTATTTCGACAGGAGTCCGTTCCAGAAGATCGATTGTCCTTACCCGTGCAACCCGACATGCCACAACCGCATTTTCGAAGCCAAAGACAACCTCGAATGA 1197 45.28 MARENFGLWLFLVASLQFFLRTQCINVGITYVQEAGIKGGVCLDGSPPAYHFSEGFGAGIDNWLIQLEGGGWCNNVTTCLQRRDTRLGSSRKMVKVLAFSGILTNKQKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPATNLHFRGARVFRAIIDNLLAKGMKNAKNAILSGCSAGGLSSILNCDHFKSLLPSTTKVKCLSDAGYFINAKDVSGTQHIADFYSDVVATHASAKNLPISCTSKMKPEMCFFPQNVVQLIQTPIFLVNAAYDSWQIKNILAPGVADPHGTWHSCKLDIKNCSPIQLRTMQDFRVQFLSALNGVGSSLSRGLFIDSCYAHCQTETQETWLRADSPTLSKTTIAKAVGDWYFDRSPFQKIDCPYPCNPTCHNRIFEAKDNLE 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2922427 2925981 - Carg11428-RA Car16g00460 163612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00460 398 Pfam Pectinacetylesterase 23 372 IPR004963 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01011 Car-Chr11:7073542 Car16g00460 Car-Chr16:2922427 3.05E-148 dispersed
Car16g00111 Car-Chr16:670951 Car16g00460 Car-Chr16:2922427 1.57E-101 dispersed
Car16g00460 Car-Chr16:2922427 Car18g01158 Car-Chr18:11375645 2.56E-124 dispersed
Car07g00974 Car-Chr7:5525808 Car16g00460 Car-Chr16:2922427 2.64E-132 transposed
Car10g01047 Car-Chr10:10771138 Car16g00460 Car-Chr16:2922427 7.42E-139 transposed
Car16g00460 Car-Chr16:2922427 Car04g00555 Car-Chr4:3139987 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00460 K19882 - csv:101214431 765.763