Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00464 ATGGCCGGCCAGTCGCGGAAGTGGCTGGTTCTGGTGGCGACGATATGGATTCAAGCATTCACCGGCACGAACTTCGATTTCTCGGCCTATTCTTCCCACGGAAGCCTCTTACTACCTCTCTCTTCTCCTCTCTTGCTGCTCCACGCGAGTCTTGTGTCTGTTGTGCAGTTGCACGAGCATTTCATTCGGCCATGGCGACGAGTTGTGTTCTTCCTGTGTTTGCTTGCGGGTTGCAGCATCTGTTGGTTCAACACAGTCTGTTTCGTCCTTTGCATTCGGAACTTCTCTGCAAATCGGCCATTGGCATTATCTCTCACTGTCAGCTTCAATGGCGTCAGTGCAGCTTTCTACACGCTCGCAGGCAACGCCATTAATCCCTCTTCGCCTCCCATTTACCTCCTTCTCAACGCTCTCATTCCGCTTCTCACTTCCATTGCCGCTTTCCTCCCCGTTCTCCATCAACCGCCGCTGCACTCGCTTTCTCTCTCCTCCGATGCCGTTCAGCGAGACTCTCTCATTTTTCTCATCTTGAATTTCCTTGCTGTCGCCGTTGGGATCTACCTTCTACTCTTCGGCTCTGTCACTTCCGCCGATCCGATGATGGCGAGGCTTCTCTTCATTGGAGCCATCGTCCTTCTCGTGTTGCCTCTTTGTATTCCCGGCGTTGTTTACGCTAATGATTGGTTCCACCGAACCGTTAACTCGAGCTTCAGCCTTGACGGATCTAGCTTCATTCTTGTCCACGACGAAGATCTTGAGTTCCACAAGGAGCTGCTTAGTCGTGAAGCGAATGGAAGCTTTGGCAATGGCGGATCTCAGTTATTTTCTGAATCTGCTTCGCTTATTGACGGTGAGATTGAATCGAAAGGCTGTTTTCCGAAATTGGTTGAGAAGGATCAATTGGCGATGCTTGGGGAAGAGCATCCGTCGAGCCGATTGGTGAAACGACTGGATTTTTGGCTGTATTTCACCGCTTACATTTGCGGTGGCACAATTGGACTCGTTTACAGTAACAATATAGGACAGATTGCGCAATCGCTAGGGTTGAGTTCAAGAACCAACGCCATCGTAACACTCTACTCCTCCTTCTCCTTCTTCGGCCGATTGCTCTCGGCCGTACCGGACTACATTCGAGCGAAATTATATTTCGCAAGAACAGGATGGCTTTCGATTGCTCTAATTCCAACTCCTATAGCTTTCTTTCTACTATCGGCGTCGTCGAGCACGGTGACGGTGTACATAGGCACGGCACTGATCGGTCTGAGCTCCGGCTTCATATTCGCAGCGGCAGTTTCCATTACGGCGGAGCTGTTCGGGCCAAATAGCTTAGGCGTTAACCACAACATTCTGATCACAAACATTCCAATCGGATCTCTTCTGTACGGCATGTTTGCAGCGGTGGTATACGATTCGCAGGGATGGAACTCCGGGCATGGAGAGGCGGTTGTGTGCATGGGAAGAAGGTGCTATTTCTTGACTTTTGTATTTTGTGGATGCATTTCTGTTGTAGGATTGGTTTCTAGCGTGTTACTGTTCTTGAGAACCAGACACGCTTATGATCACTTCGAAAGTAGTAGGATTTCCAGTAGTTCAAGTAGATTGTATTAA 1608 49.5 MAGQSRKWLVLVATIWIQAFTGTNFDFSAYSSHGSLLLPLSSPLLLLHASLVSVVQLHEHFIRPWRRVVFFLCLLAGCSICWFNTVCFVLCIRNFSANRPLALSLTVSFNGVSAAFYTLAGNAINPSSPPIYLLLNALIPLLTSIAAFLPVLHQPPLHSLSLSSDAVQRDSLIFLILNFLAVAVGIYLLLFGSVTSADPMMARLLFIGAIVLLVLPLCIPGVVYANDWFHRTVNSSFSLDGSSFILVHDEDLEFHKELLSREANGSFGNGGSQLFSESASLIDGEIESKGCFPKLVEKDQLAMLGEEHPSSRLVKRLDFWLYFTAYICGGTIGLVYSNNIGQIAQSLGLSSRTNAIVTLYSSFSFFGRLLSAVPDYIRAKLYFARTGWLSIALIPTPIAFFLLSASSSTVTVYIGTALIGLSSGFIFAAAVSITAELFGPNSLGVNHNILITNIPIGSLLYGMFAAVVYDSQGWNSGHGEAVVCMGRRCYFLTFVFCGCISVVGLVSSVLLFLRTRHAYDHFESSRISSSSSRLY 535
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2943618 2949687 + Carg11432-RA Car16g00464 163616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00464 535 Pfam Nodulin-like 68 220 IPR010658 -
Car16g00464 535 Pfam Nodulin-like 7 33 IPR010658 -
Car16g00464 535 ProSiteProfiles Major facilitator superfamily (MFS) profile. 317 535 IPR020846 GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00863 Car-Chr8:5780786 Car16g00464 Car-Chr16:2943618 8.09E-09 dispersed
Car08g00864 Car-Chr8:5784922 Car16g00464 Car-Chr16:2943618 9.40E-06 dispersed
Car16g00464 Car-Chr16:2943618 Car07g00642 Car-Chr7:3258017 9.23E-56 dispersed
Car16g00464 Car-Chr16:2943618 Car13g00006 Car-Chr13:85935 3.81E-61 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00464 - - csv:101211287 825.854