Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00506 ATGGCGGTCAATACGACGATGGTGGCTGGCTGTCCGGCGGCAATGAAAGCAACGTCGAACGGCGTGTTTCAAGGCGACAACCCTCTTGACTTCGCTCTCCCTTTGGCTATTCTTCAAATATGTTTGGTAGTGATTCTTACGCGTCTTCTTGGATTGCTTCTCCGACCGCTTAGACAACCTCGAGTCATTGCTGAGATTGTGGGTGGAATATTGCTGGGACCGTCGGCGGTAGGGCGGAGCCAAGAATTCCTACACAGAGTATTTCCGGCGAAAAGCTTATCGGTTTTGGACACGTTGGCGAATTTGGGTCTTTTGTTCTTCCTTTTTCTGGTGGGGTTGGAGTTAGATCCCAACTCCCTCCGCCGTACCGGAAAGGGTGCAATGTCTATAGCCGCCGCCGGAATCACCCTCCCTTTCATCCTCGGCATTGGCACCTCCTTTGTACTCCGCTCCACCATCTCCAAAGGGGTCGACGGCCCTCCTTTTCTGGTTTTCATGGGCGTAGCTCTCTCCATTACTGCTTTCCCTGTCCTCGCCCGCATCCTCGCCGAGCTCAAGCTCTTAACCACCAACGTTGGTCGAATGGCCATGTCCGCCGCCGCCGTTAACGACGTCGCCGCCTGGATCCTCCTCGCCCTTGCCATCGCCCTCTCCGGCACCGGCAACTCCCCTCTCGTTGCCCTCTGGGTCTTCCTCTGTGGCTCTGGTTTTGTCCTGCTCTGCTTCTTCACTCTCCCGCCGGTCTTCCGGTGGATGTCCCTCCGTTGCGCCGACGGCGAGCCGGTTAGCGAACTCTACATTTGCGCCACTTTATCCACCGTCTTGGCCGCTGGATTCATCACCGATTTAATCGGAATCCATGCTCTGTTCGGCGCTTTCGTCGTCGGCGTCCTCGTCCCAAAAGACGGCCCACTCGCCGGAGCTCTTGTCGAGAAAGTCGAAGATCTCGTCTCGGGGTTATTCCTCCCTCTGTATTTCGTATCAAGTGGATTGAAAACCGACATTACAACAATCAAAGGAGCTCAATCATGGGGTCTTCTCGTACTCGTCGTTGTCACCGCTTGTTTTGGGAAAATCATCGGCACAATATCAGTGGCTCTGCTTTGCAAGATGCCATTCCGTGAATCTCTGGCTTTAGGATTCTTAATGAACACAAAAGGGCTTGTGGAATTGATCGTCCTCAACATTGGGAAAGACAGAAAAGTTTTAAACGAACAGACGTTTGCAATTCTTGTTCTAATGGCGATCATCACAACCTTCATCACTACCCCAATTGTAATGGCGGTTTACAAGCCGGCCAAAAAACAGAGCAAATCCGATTACACGAACAGGACAATCGAGCGCCAGGACACCAATTCTGAGCTGCGGATTTTGGCTTGCTTTCACTCTGTTACCAATATCCCTTCAATTTTGAATCTAATTGAGGTTTCCCGTGGGACGGAGGGGAAAGAAGCCCGTGGTCGGCGGCTTTGCGTTTATGCAATGCATTTAATGGAGCTGACGGAGAGGTCGTCCGCCATTGTTATGGTCCACCGAGCTCGAAAAAATGGCCTACCCTTCTGGAATAAAGGAGGAAAGTCCGACTCCGACCAAATCGTTGTGGCATTTGAGGCTTTTCAGCAGCTAAGTCGAGTGTCTATTCGTCCAATGACAGCGATTTCTCCGTTCTCCAACATGCACGAAGATGTCTGCAACAGCGCCGAGAGGAAACGCGCCGCCATTATCATCCTCCCATTCCACAAACACCAAAGGTTCGATGGATCTTTGGAGACGACACGAGCTGATTTCCGATGGGTAAATCAAAAAGTGCTGGAGCAACCACCATGCTCTGTCGGGATCTTGGTCGACAGAGGTTTAGGAGGCGGTTCCCATATCTGTGCTAGCAATGTCTCATCCACCATAACCGTCTTCTTCTTCGGCGGCCGAGACGACCGTGAAGCTCTAGCCTACGGTCGGAGAATGGCAGAGCATCCGGGAATAACACTAAACGTGGTTCGCTTCCTTCCCAGCTCCGACATCGGCGTTGAATCCACGGTGGTTGACATTGATCAAACAATACTGACGGAGTTCAAGGAGAGAAAAACAGAGGACGAGTCGGTGAGGTACGAGGAGAGGGCGGTGGGGAAAGGCAGCGAGGCTGTTGAAGTAATCAAGGAGTTCAGTCGATGCCATTTGATATTGGTGGGTCAGGCGCCGGAAGGGCCAGTCTTTGAGAGCCTCCATTTGAAGATCAATGCCGAGTTCTCGGAGTTGGGTCCCGTCGGCGGCTTGTTGACATCACCGGAGCTCTCGACGGCAGCTTCCGTGTTGGTGGTGCAACAGTTTCGAGGTCCGTTGGTGCCATCTCCATCGACGTCCACGGCCATGGTCTTGCCGGAAGACGTTGAAAGAAACAGAGGGGCTTCAAGATCTCTGCGGCCAACAATGGCGATCAATGCGACGGCGACCGGTGCTTGTCCGGCGGTCATGAAGGCCACCTCTAATGGCGTCTTCCAAGGCGATAACCCTTTGAATTATGCTCTCCCTCTCGCCATCCTTCAGATTTGTCTCGTCGTCCTCCTCACTCGACTCCTTTCCATTCTTCTTCGCCCCATTCGTCAGCCTCGTGTCATTGCTGAGATCGTCGGCGGGATCTTGCTGGGTCCGTCGGCGCTTGGCCGGAACGTGAATTACTTACACACAATCTTTCCGGCGAGGAGTATCACTGTATTGGACACGTTAGCCAATTTGGGTCTTCTCTTCTTCCTGTTTTTGGTGGGGTTGGAGTTGGACCCAAAAGCTCTCCGCCGTACCGGAAAACGAGCGATGTGCATTGCCTTTGCCGGAATCACTCTCCCGTTTGTCTTTGGCATTGGCACCTCATTTGTACTCCGATCGACCATCTCCAAAGGCGTCAATCAAGGTGCACTCCTCGTCTTCATGGGTGTAGCTCTTTCCATCACTGCGTTTCCTGTTCTGGCTAGAATTTTGGCTGAGCTTAAGCTTTTAACGACGGATGTTGGTCGGATGGCTATGTCGGCTGCCGCTGTTAACGACGTCGCGGCATGGATCCTTCTAGCATTGGCAATTTCACTCTCCGGCACCGGACATTCCCCTTTTGTTTCCTTATGGGTTTTTCTCTCTGGCTCTGCTTTTGTCGTGCTTTGCATTTGCTCTGCTCCACCTCTGTTCCGGTGGATGTCGCAACGGTGCTCCGAAGGCGAGCCGGTGAAGGAGTTATACATTTGTGCTACTTTGTCTCTGGTTTTGGCGGCTGGGTTCATTACGGATTTGATCGGAATCCATGCCTTGTTCGGAGCTTTTGTGATCGGAGTTTTGGTTCCGAAAGAAGGCCCATTCGCCGTCGCTCTGGTGGAGAAAGTTGAAGATCTCGTGTCGGGTCTTTTTCTTCCATTATACTTCGTTTCCAGTGGATTGAAAACAGATGTTGCAACAATTCGAGGAGCTCAATCATGGGGTCTTCTCGTTTTAGTCATTTTCAATGCTAGTTTCGGTAAAATCGTCGGAACTGTCTCTGTTGCTCTGCTCTGCAAAATGCCATTTAAAGAATCAGTAGCTTTGGGGGTTTTGATGAACACGAAAGGCTTGGTGGAATTAATTGTTCTTAACATTGGAAGAGACAGGAAGGTTTTGAATGATCAATCATTTGCTATTATGGTTCTAATGGCGATCTTCACAACGTTCATAACAACCCCTGTTGTTATGGCTGTTTATAAGCCGGAGAAAAAACAGAGCAAATCAAATTACAAACATAGAACACTCGAAAGAGAAAATCCCAATTCTGAGCTTCGAATTCTTGCTTGTTTCCACTCATTTAGCAACATTCCGGCGACGATTAATTTAATCGAGGCATCCCGAGGGATTGAAAAGAAGGAAGGGCTCTGTGTTTATGCTCTGCATTTAATGGAGCTAACAGAGCGATCCTCTGCCATTCTTATGGTTCATAAAGCAAGGAAAAATGGCGTACCCTTTTGGAACAAAGGCCGTGCCGATTCAAACCAGATCGTCGTTGCCTTCGAGGCATTCCGACAGCTCAGCCGTGTTTCAATCCGGCCAATGACCGCCATTTCTGCTCTGTCCAACTTGCATGAAGACATCTGTAACAGCGCCGAGACGAAAAGGGCGGCCATTATAATTCTCCCGTTTCACAAGCATCAAAGATTGGATGGATCCATGGAAACGACAAGGACTGATTACCGGTCGGTCAACCGAAAAGTTCTGGAACTAGCTCCCTGCTCTGTCGGAATTTTGATCGACAGAGGCCTCGGTGGTGGGTCCCACGTCTGCGCTAGTAACGTCTCTTCCACTGTTACCGTGTTTTTCTTCGGCGGTCGTGACGATCGTGAAGCTCTAGCATTTGGTAAAAGAATGTCAGAGCATCCAGGAATCAGCCTACATGTCGTCCGGTTCTCCCCCAGCGCCGATTTCGCGGCGGAATCCGTCACCGTCGATGTAAAAGACAACGGTTCCACCGATTCCAATGCCGATAAAATGGCATTGGCGTCGATTGTATATGAAGAGAGATACGTGACGAAAGGGAGCCAAGCCGTTGAAGCGATGAAGGAGTTTAATAAATGTAATTTGATTTTGGTCGGAAGAACGCCGGAAGGGGAAGTGGTGAGGAGTTTGAATATGAATGTTGTGGAGGGTTCGGAACTTGGGCCGGTCGGCGGCGTGTTGGCGTTGCCGGAGTTCTCGACGATGGCGTCGGTGCTGGTGGTGCAGCAGTTTCACGGTGATTTACAGTTGATCGCGGATTCGGCTTCCAAAGGGGAATCAACTGAGGAAGAACGTCGATCACTCGCGCACTGGAAGATTGCCATTGCAAGGAAGCCTATTTTGAACAGGAACTGA 4854 50.84 MAVNTTMVAGCPAAMKATSNGVFQGDNPLDFALPLAILQICLVVILTRLLGLLLRPLRQPRVIAEIVGGILLGPSAVGRSQEFLHRVFPAKSLSVLDTLANLGLLFFLFLVGLELDPNSLRRTGKGAMSIAAAGITLPFILGIGTSFVLRSTISKGVDGPPFLVFMGVALSITAFPVLARILAELKLLTTNVGRMAMSAAAVNDVAAWILLALAIALSGTGNSPLVALWVFLCGSGFVLLCFFTLPPVFRWMSLRCADGEPVSELYICATLSTVLAAGFITDLIGIHALFGAFVVGVLVPKDGPLAGALVEKVEDLVSGLFLPLYFVSSGLKTDITTIKGAQSWGLLVLVVVTACFGKIIGTISVALLCKMPFRESLALGFLMNTKGLVELIVLNIGKDRKVLNEQTFAILVLMAIITTFITTPIVMAVYKPAKKQSKSDYTNRTIERQDTNSELRILACFHSVTNIPSILNLIEVSRGTEGKEARGRRLCVYAMHLMELTERSSAIVMVHRARKNGLPFWNKGGKSDSDQIVVAFEAFQQLSRVSIRPMTAISPFSNMHEDVCNSAERKRAAIIILPFHKHQRFDGSLETTRADFRWVNQKVLEQPPCSVGILVDRGLGGGSHICASNVSSTITVFFFGGRDDREALAYGRRMAEHPGITLNVVRFLPSSDIGVESTVVDIDQTILTEFKERKTEDESVRYEERAVGKGSEAVEVIKEFSRCHLILVGQAPEGPVFESLHLKINAEFSELGPVGGLLTSPELSTAASVLVVQQFRGPLVPSPSTSTAMVLPEDVERNRGASRSLRPTMAINATATGACPAVMKATSNGVFQGDNPLNYALPLAILQICLVVLLTRLLSILLRPIRQPRVIAEIVGGILLGPSALGRNVNYLHTIFPARSITVLDTLANLGLLFFLFLVGLELDPKALRRTGKRAMCIAFAGITLPFVFGIGTSFVLRSTISKGVNQGALLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAISLSGTGHSPFVSLWVFLSGSAFVVLCICSAPPLFRWMSQRCSEGEPVKELYICATLSLVLAAGFITDLIGIHALFGAFVIGVLVPKEGPFAVALVEKVEDLVSGLFLPLYFVSSGLKTDVATIRGAQSWGLLVLVIFNASFGKIVGTVSVALLCKMPFKESVALGVLMNTKGLVELIVLNIGRDRKVLNDQSFAIMVLMAIFTTFITTPVVMAVYKPEKKQSKSNYKHRTLERENPNSELRILACFHSFSNIPATINLIEASRGIEKKEGLCVYALHLMELTERSSAILMVHKARKNGVPFWNKGRADSNQIVVAFEAFRQLSRVSIRPMTAISALSNLHEDICNSAETKRAAIIILPFHKHQRLDGSMETTRTDYRSVNRKVLELAPCSVGILIDRGLGGGSHVCASNVSSTVTVFFFGGRDDREALAFGKRMSEHPGISLHVVRFSPSADFAAESVTVDVKDNGSTDSNADKMALASIVYEERYVTKGSQAVEAMKEFNKCNLILVGRTPEGEVVRSLNMNVVEGSELGPVGGVLALPEFSTMASVLVVQQFHGDLQLIADSASKGESTEEERRSLAHWKIAIARKPILNRN 1617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3230834 3242550 + Carg22230-RA Car16g00506 163658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00506 1617 Pfam Sodium/hydrogen exchanger family 41 425 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Car16g00506 1617 Pfam Sodium/hydrogen exchanger family 849 1233 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00658 Car-Chr4:3826180 Car16g00506 Car-Chr16:3230834 0 dispersed
Car16g00506 Car-Chr16:3230834 Car11g01295 Car-Chr11:10743030 8.56E-118 dispersed
Car16g00506 Car-Chr16:3230834 Car16g00507 Car-Chr16:3242592 0 tandem
Car02g00450 Car-Chr2:3533367 Car16g00506 Car-Chr16:3230834 0 transposed
Car03g00155 Car-Chr3:2852012 Car16g00506 Car-Chr16:3230834 3.17E-89 transposed
Car07g01313 Car-Chr7:8198153 Car16g00506 Car-Chr16:3230834 1.69E-139 transposed
Car20g00913 Car-Chr20:9886724 Car16g00506 Car-Chr16:3230834 0 transposed
Car16g00506 Car-Chr16:3230834 Car04g00657 Car-Chr4:3822779 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00506 - - pper:18775237 1355.5