Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00507 ATGGCTTCGAATGCTACGACAGTAACCAAATGTCCATCTCCAATGAAAGCAACATCGAACGGCATTTTCCAGGGCGATAATCCTCTTGATTTCGCTCTTCCTCTTGTCATTCTACAAATATGTTTGGTAGTTGTTCTTACTCGTGGTCTTGCTTTTCTTCTGAGGCCGTTAAAACAGCCGCGAGTGATCGGAGAAATCATTGGAGGAATACTTCTAGGACCATCAGCTCTCGGACGTAACAAGAACTTTCTTCATACGATATTTCCATCCAATAGTATCACGTTGTTAGATACCATAGCGAACATCGGATTGTTATTCTTTCTGTTTCTTGTGGGTCTCGAGTTGGATATAAAGTCGATACGTCGTACTGGAAAGAAGGCTCTTGGCATTGCCATTACCGGAATTTGCCTTCCGTTTGCATTAGGAATTGGATCGTCATTTGTTCTTCGAGAAACCATATCCAAAGGTGTAAATGCTTCTGCGTTTCTCATATTCATGGGTGTTGCACTTTCGATAACGGCATTTCCCGTCTTAGCTCGTATTCTTGCCGAGCTTAAACTACTGACAACTGATGTTGGTAGGATGGCTATGTCTGCTGCAGCAGTAAACGACGTAGCTGCCTGGATTCTCCTTGCTCTCGCCATTGCGCTATCTGGTTCTGATAAATCTCCCCTAACTGCAGTTTGGGTCCTTTTATCTGGCTGTGGCTTTGTTATAGCTGCTATTGTCATTTTATCCCCTGTTTTCAAATGGATGACCAAGCAGTGTTTTCAAGGGGAGCCGGTACGTGAAATCTACATATGCGCTACATTGGCGATCGTCCTAGCTGCTGGATTTGCCACGGATTTTATCGGTATACATGCTATGTTTGGAGCTTTTGTTGTCGGAGTATTAGTTCCAAAGGATGGACCATTAGTAGGTGCATTGGTAGAGAAAATAGAGGATCTTGTTTCTGGTCTATTCCTGCCTCTTTACTTTGTCTCAAGTGGATTGAAGACTAATGTAGCCACAATTCAAGGAGCACAGTCCTGGGGTCTCCTAGTTTTAGTTATCGTTACCGCCTGTTCTGGAAAAATCATTGGCACGTTTCTCGTGTCCATTCTTTGTAAAGTACCCGTTCGTGAGGCTCTTGCATTAGGATTTCTAATGAACACAAAAGGGTTGGTGGAGCTTATTGTTCTCAATATTGGAAAAGACAGAAAGGTTTTGAATGACCAAACCTTTGCTATAATGATTCTAATGGCTCTTTTTACTACTTTCATTACCACTCCCCTTGTCATTGCTGTATACAAACCGGCAAGGAGTGCCAAAATAGCTGATTATAAGCATAGGAAGATTGAAAGGAAAAACAAGAACACACAACTTCGGATTATGACCTGTTTTCATAGTGCAGGAAACATTCCGTCGATTATTAATCTGCTCGAGGTGTCCAGAGGAACCGAGAAGGACAAAGAGCTTTGTGTATATGCAATGCATCTCATGGAGCTGTCCGAGAGGTCCTCGGCCATTTTAATGGTTCACAAGGCGAGGAAAAACGGGTTGCCTTTCTCGATCAAGGGTCGGAGGTCAGATTCCAACCATGTTATTGTTGCATTTGAAGCTTACCGACAACTGAGCAGAGTATTCATTCGACCGATGACGGCGATTTCCTCCATGTCTGATATACATGAAGATATTTGTGCCACTGCTGAGAGGAAAAAAACTGCAATCATAATTCTTCCATTTCATAAGCACCTGAGGGTGGATGGTTCGCTGGAGACTACTCGTAGCAGCATTCGTGTTGTTAATCAGAATGTACTCGAACATGCTCGATGTTCGGTTGGAATTTTAGTTGATCGTAGTTTTGGTGGAACAACCCATGTTTCATCGAGCCATGTTTCGCTTTTCGTCACTGTTTTATTCTTTGGTGGTGGAGATGATCGCGAAGCGCTTTCTTATGGAATTCGTATGGCCGAGCACCCTGGGATTAGATTGATGGTTATTCGTTTCCTTGTCGAACCCGAACCTTCTGGGGAGATAGTCAGTGCTGATACTGTTGGCAATTCTCCTGTGAAGTCAGTTTCTCAGGATGATGAATTTCTTTCCGAGTTCAAGCACGATACGTGCAAGAATGATTCCATAATATATGTCGAGAAAACCGTAAGAAGTGCTGCAGAAGTAATGGATACAGTGCAGGAGATGAAAAACTGCAATCTGTATCTCGTTGGGCGAACACCAGATATCAAAGCGACATATATCTTGAACAGAAGCGACTGTCCAGAGCTCGGTCCAGTCGGGAACCTGTTGACTTCCCCAAACTTCCCGAGTTTGGCGTCGGTTTTGGTGGTGCAGCAATATCGTTCCGAGTCGCTGGTGAATTCAGCTTCAGATTCTGGTGATGGAGAATCAGAATCAGCATAG 2400 43.67 MASNATTVTKCPSPMKATSNGIFQGDNPLDFALPLVILQICLVVVLTRGLAFLLRPLKQPRVIGEIIGGILLGPSALGRNKNFLHTIFPSNSITLLDTIANIGLLFFLFLVGLELDIKSIRRTGKKALGIAITGICLPFALGIGSSFVLRETISKGVNASAFLIFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSDKSPLTAVWVLLSGCGFVIAAIVILSPVFKWMTKQCFQGEPVREIYICATLAIVLAAGFATDFIGIHAMFGAFVVGVLVPKDGPLVGALVEKIEDLVSGLFLPLYFVSSGLKTNVATIQGAQSWGLLVLVIVTACSGKIIGTFLVSILCKVPVREALALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMILMALFTTFITTPLVIAVYKPARSAKIADYKHRKIERKNKNTQLRIMTCFHSAGNIPSIINLLEVSRGTEKDKELCVYAMHLMELSERSSAILMVHKARKNGLPFSIKGRRSDSNHVIVAFEAYRQLSRVFIRPMTAISSMSDIHEDICATAERKKTAIIILPFHKHLRVDGSLETTRSSIRVVNQNVLEHARCSVGILVDRSFGGTTHVSSSHVSLFVTVLFFGGGDDREALSYGIRMAEHPGIRLMVIRFLVEPEPSGEIVSADTVGNSPVKSVSQDDEFLSEFKHDTCKNDSIIYVEKTVRSAAEVMDTVQEMKNCNLYLVGRTPDIKATYILNRSDCPELGPVGNLLTSPNFPSLASVLVVQQYRSESLVNSASDSGDGESESA 799
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3242592 3245245 + Carg22229-RA Car16g00507 163659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00507 799 Pfam Sodium/hydrogen exchanger family 42 425 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00383 Car-Chr3:4611028 Car16g00507 Car-Chr16:3242592 0 dispersed
Car04g00657 Car-Chr4:3822779 Car16g00507 Car-Chr16:3242592 0 dispersed
Car04g00659 Car-Chr4:3830303 Car16g00507 Car-Chr16:3242592 8.36E-20 dispersed
Car07g00960 Car-Chr7:5432841 Car16g00507 Car-Chr16:3242592 0 dispersed
Car16g00507 Car-Chr16:3242592 Car20g00913 Car-Chr20:9886724 0 dispersed
Car16g00506 Car-Chr16:3230834 Car16g00507 Car-Chr16:3242592 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00507 - - csv:101223205 1366.67