Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car16g00531 | ATGGCGCTTAAAGTTTATGTGGATCGGATGTCACAGCCATCTCGCGCCGTCCTCATCTTCTGCAAGGTTAACGGGATTGCATTTGAGGAGGTGCGGGTAGACTTGTCCAAACTCCAACAGCTGTCTCCCGAATTCAAAGAGGTCAACCCAATGGCAAAGGTTCCTGCCATTGTTGATGGGAGATTTAAGCTGTTCGAGAGTCATGCTATTCTTATCTACCTTTCTTGTGCGTTTCCTGGTGTGGCAGATCACTGGTATCCAGCTGATCTTTTCAGGAGGGCTAAAATAAACTCTGTATTGGACTGGCATCATTCTAATTTACGGATTGGTGCAGCTCCTTTTGTATTCTCTACTGTTCTAGCACCTTTGTTTGGCCGTCCTCAGAATTCTCAAGCAGCTGCTGAAGCTGAGGTGCTTTTATCCAAGTCACTTTCGAAAATCGAGTCGTTTTGGCTGAAGGGGAACGGGAAGTTTTTGGTAGGCGGCCTTAAACCATCCATAGCTGATCTTAGCTTGGTTTGTGAAATCATGCAACTAGAGACATTTCATGGATTTCACTGGACTCTAATGGTGGTGGTTAACTTGTTGAATATGCAGCTTTTGGATGAGAAGGATCGCAGTCGAATTCTGGGTCCGTACCAGAAAGTGAGGGAGTGGGTTGAGAATACTAGAAATGCTGCAAACCCACATTTTGATGAGGTTCATAAGCTTCTCTTTAAGCTCAAAGCAACCCTTCAAAAGCAGCGCTCAGAAAAATTGACTTCAAAGATGTGA | 774 | 44.83 | MALKVYVDRMSQPSRAVLIFCKVNGIAFEEVRVDLSKLQQLSPEFKEVNPMAKVPAIVDGRFKLFESHAILIYLSCAFPGVADHWYPADLFRRAKINSVLDWHHSNLRIGAAPFVFSTVLAPLFGRPQNSQAAAEAEVLLSKSLSKIESFWLKGNGKFLVGGLKPSIADLSLVCEIMQLETFHGFHWTLMVVVNLLNMQLLDEKDRSRILGPYQKVREWVENTRNAANPHFDEVHKLLFKLKATLQKQRSEKLTSKM | 257 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 16 | 3367926 | 3370617 | - | Carg22205-RA | Car16g00531 | 163683 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car16g00531 | 257 | Pfam | Glutathione S-transferase, N-terminal domain | 1 | 74 | IPR004045 | - | |
| Car16g00531 | 257 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 82 | IPR004045 | - | |
| Car16g00531 | 257 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 89 | 246 | IPR010987 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car08g00362 | Car-Chr8:2341432 | Car16g00531 | Car-Chr16:3367926 | 5.24E-10 | dispersed | |
| Car16g00531 | Car-Chr16:3367926 | Car17g01048 | Car-Chr17:8193561 | 3.22E-10 | dispersed | |
| Car16g00531 | Car-Chr16:3367926 | Car04g00676 | Car-Chr4:3931288 | 4.01E-140 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car16g00531 | K00799 | - | csv:101211608 | 411.379 |