Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00540 ATGTTCGAGAACAATCCTGACCCCATTCGGATGCGAATTCGTGATGGAAACATACGGATTCTTGCCGCGTTCCCCAAAATCTCTATAAATAATCCCTATACCGCTGAGCGTTGGTCGCATCATTCGTTGTCCGTTCTCTGTTCTTCAGTACCCTCTCTCGTGGATGATCTACGGTTGGGTCTTAGTTTGTATCGGCCGGATTCTCGTCTTGCTTGTTTAGATTCTGTTGTTCGGTTTTATGAGTATATGATTGTGGGTGTTCGAGTTTTGATCCAAACAAGGTTGATGGTTGAAATAGACGTCCAAATCCCATCTGCTTACGATCCATTCGCAGACGCCAAGGATTCCGATGCCCCGGGAGGCAAAGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGAAGTGCTTGACAACAGTCCAGGGTCTGAAGAAGGATTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTTTGCTGTAATGGTAACGTCGTCCAAGACAAAGAATTGGGGAAGATAATTCAGCTTCAGGGCGATCAGCGCAAGAACGTGTCTCAGTTCCTGGTTCAGGCTGGGATTGTTAAGAAGGATCAGATCAAAATCCATGGATTTTAA 624 45.99 MFENNPDPIRMRIRDGNIRILAAFPKISINNPYTAERWSHHSLSVLCSSVPSLVDDLRLGLSLYRPDSRLACLDSVVRFYEYMIVGVRVLIQTRLMVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 207
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3428428 3429726 + Carg05625-RA Car16g00540 163692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00540 207 ProSiteProfiles Translation initiation factor SUI1 family profile. 125 195 IPR001950 GO:0003743|GO:0006413
Car16g00540 207 Pfam Translation initiation factor SUI1 122 196 IPR001950 GO:0003743|GO:0006413
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car09g00869 Car16g00540 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01522 Car-Chr11:12252466 Car16g00540 Car-Chr16:3428428 1.22E-60 dispersed
Car16g00540 Car-Chr16:3428428 Car19g00721 Car-Chr19:8228536 9.54E-56 dispersed
Car16g00540 Car-Chr16:3428428 Car09g00869 Car-Chr9:5316227 6.16E-70 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00540 K03113 - csv:101202908 219.55