Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car16g00541 | ATGGTGGGGACACTTTCGATTCGCCTCGAGCGCCTTCATGTAATATTTACTCATACTATGGAAGGTACAGTTCTTAGAAGGGTTATTCCATCAGACAACAGTTGCCTCTTTAATGCTGTTGGTTATGTTATGGACCACGACAAAGGCAAGGCTACCGAGCTAAGACAGGTCATAGCTGCAACAGTAGCTAGTGATCCAACAAGGTATTCTGAAGCGTTTCTTGGAAAGCCAAATGAGGAGTACTGTGCTTGGATTCTTGATTCAGAGAAGTGGGGAGGCGCCATTGAGCTTTCGATACTATCTGAATATTATGGACGTGAAATTGCAGCATACGACATCCAGACAACACGATGTGATTTGTATGGTCAGGAAAAGAAGTATTCAGAAAGGGTTCTGCTGATATATGACGGACTCCACTATGATGCTTTAGTTATGTCTCCATTTGAGGGAGCTCCAGAAGAATTTGATCAGACCATATTTTCTGTGAATAGAGACAGGAGCATTGGGCCCATTGAGGAGCAAGCTCTCCATTTTGTAAAAGAGCAGCAAAGGAAACGGAGCTTCACCGACGCCGCCAACTTCACTCTGCGCTGTGGGGTTTGCCAAATTGGAGTCATCGGCCAAACGGTATTCCTCGTCCAAATTTGA | 648 | 44.91 | MVGTLSIRLERLHVIFTHTMEGTVLRRVIPSDNSCLFNAVGYVMDHDKGKATELRQVIAATVASDPTRYSEAFLGKPNEEYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLHYDALVMSPFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTDAANFTLRCGVCQIGVIGQTVFLVQI | 215 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 3433298 | 3438494 | + | Carg05626-RA | Car16g00541 | 163693 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car16g00541 | 215 | Pfam | OTU-like cysteine protease | 31 | 125 | IPR003323 | - | |
Car16g00541 | 215 | ProSiteProfiles | OTU domain profile. | 24 | 146 | IPR003323 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car09g00867 | Car16g00541 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car16g00541 | Car-Chr16:3433298 | Car09g00867 | Car-Chr9:5303948 | 4.14E-134 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car16g00541 | K13719 | - | csv:101222942 | 363.614 |