Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00541 ATGGTGGGGACACTTTCGATTCGCCTCGAGCGCCTTCATGTAATATTTACTCATACTATGGAAGGTACAGTTCTTAGAAGGGTTATTCCATCAGACAACAGTTGCCTCTTTAATGCTGTTGGTTATGTTATGGACCACGACAAAGGCAAGGCTACCGAGCTAAGACAGGTCATAGCTGCAACAGTAGCTAGTGATCCAACAAGGTATTCTGAAGCGTTTCTTGGAAAGCCAAATGAGGAGTACTGTGCTTGGATTCTTGATTCAGAGAAGTGGGGAGGCGCCATTGAGCTTTCGATACTATCTGAATATTATGGACGTGAAATTGCAGCATACGACATCCAGACAACACGATGTGATTTGTATGGTCAGGAAAAGAAGTATTCAGAAAGGGTTCTGCTGATATATGACGGACTCCACTATGATGCTTTAGTTATGTCTCCATTTGAGGGAGCTCCAGAAGAATTTGATCAGACCATATTTTCTGTGAATAGAGACAGGAGCATTGGGCCCATTGAGGAGCAAGCTCTCCATTTTGTAAAAGAGCAGCAAAGGAAACGGAGCTTCACCGACGCCGCCAACTTCACTCTGCGCTGTGGGGTTTGCCAAATTGGAGTCATCGGCCAAACGGTATTCCTCGTCCAAATTTGA 648 44.91 MVGTLSIRLERLHVIFTHTMEGTVLRRVIPSDNSCLFNAVGYVMDHDKGKATELRQVIAATVASDPTRYSEAFLGKPNEEYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLHYDALVMSPFEGAPEEFDQTIFSVNRDRSIGPIEEQALHFVKEQQRKRSFTDAANFTLRCGVCQIGVIGQTVFLVQI 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3433298 3438494 + Carg05626-RA Car16g00541 163693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00541 215 Pfam OTU-like cysteine protease 31 125 IPR003323 -
Car16g00541 215 ProSiteProfiles OTU domain profile. 24 146 IPR003323 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car09g00867 Car16g00541 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00541 Car-Chr16:3433298 Car09g00867 Car-Chr9:5303948 4.14E-134 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00541 K13719 - csv:101222942 363.614