Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00554 ATGATCTGCGCGGTGAAACAATCTCCTAGGGCTATCATTTGCTCTGATGTTGTTATTCGGCCCAAAATCTCCGTTCCCTCTCAGCGATCCTCGTTTCTTCCTCCACTTCCGTTACAAAAACCTCGAAACTCCGCTGTTTCTGTTCATAAACCTGTACATGTTTCATCGCTTGAGAAATTTGGATCACTGGGGGTTCGTAAAGCTAATTTGATCAAATGCGAAGCTTACGAGGCTGAGCGATCGCAGCCGATCGATTCGAGCTTTGAGTTGCCGCAGACACCGACCCCTTCAGAGGCCGCCAAGAAGTTGAAAATAGGATCATACTTCGCTCTATGGTGGGCTTTGAACGTGGTTTTCAATATCTATAACAAGAAGGTTTTGAACGCTTACCCGTTTCCATGGCTGACTTCGACTCTGTCCCTCGCCGCTGGATCTCTGATCATGTTGATCTCATGGATGACAAGAATTGCAGAGGCGCCTAAAACTGATCTTGAGTTTTGGAAGTCTTTGTTCCCTGTTGCTATTGCCCATACAATTGGACATGTTGCAGCGACCGTGAGTATGTCAAAGGTTGCTGTTTCATTCACTCACATCATCAAGAGTGGTGAACCTGCTTTTAGTGTATTGGTTTCGAGGTTCTTGTTGGGCGAGACCTTCCCGCTTCCTGTCTACTTGTCGCTCCTCCCAATTATCGGTGGATGCGCTCTTGCTGCTGTGACTGAGCTCAACTTTAACATGACGGGTTTCATGGGTGCCATGATATCGAACTTGGCATTCGTATTCCGTAACATATTTTCGAAGAGGGGCATGAAGGGAAAATCCGTTAGCGGGATGAACTACTATGCATGTTTATCGATTTTATCTTTGCTAATCCTTACACCATTTGCATTTGCTGTGGAGGGGCCTCAGTTATGGGCTGCTGGATGGAAAACAGCCATATCTCAAATCGGACCTCATTTTGTTTGGTGGGTAGCAGCACAAAGTATATTCTACCATCTCTATAACCAAGTGTCTTACATGTCCTTGGACGAGATTTCTCCCTTGACGTTCAGCGTCGGAAACACCATGAAACGTATATCTGTCATCGTTTCTTCCATCATCATCTTCCGCACGCCTGTGCAGCCAGTGAATGCTCTCGGAGCTGCCATTGCGATTCTCGGAACCTTTATATACTCGCAGGCAAAGCAATGA 1191 46.35 MICAVKQSPRAIICSDVVIRPKISVPSQRSSFLPPLPLQKPRNSAVSVHKPVHVSSLEKFGSLGVRKANLIKCEAYEAERSQPIDSSFELPQTPTPSEAAKKLKIGSYFALWWALNVVFNIYNKKVLNAYPFPWLTSTLSLAAGSLIMLISWMTRIAEAPKTDLEFWKSLFPVAIAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSILSLLILTPFAFAVEGPQLWAAGWKTAISQIGPHFVWWVAAQSIFYHLYNQVSYMSLDEISPLTFSVGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAILGTFIYSQAKQ 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3501529 3505189 - Carg05639-RA Car16g00554 163706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00554 396 Pfam Triose-phosphate Transporter family 103 392 IPR004853 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00254 Car-Chr7:1384791 Car16g00554 Car-Chr16:3501529 0 dispersed
Car13g00725 Car-Chr13:8397225 Car16g00554 Car-Chr16:3501529 1.62E-64 dispersed
Car16g00554 Car-Chr16:3501529 Car18g01023 Car-Chr18:10615821 3.66E-60 dispersed
Car06g00995 Car-Chr6:7584412 Car16g00554 Car-Chr16:3501529 1.42E-100 transposed
Car09g00852 Car-Chr9:5211866 Car16g00554 Car-Chr16:3501529 1.68E-55 transposed
Car16g00851 Car-Chr16:6217793 Car16g00554 Car-Chr16:3501529 0 transposed
Car16g00554 Car-Chr16:3501529 Car03g00473 Car-Chr3:5048716 5.49E-180 wgd
Car16g00554 Car-Chr16:3501529 Car09g00851 Car-Chr9:5210024 7.73E-152 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00554 K15283 - csv:101220046 718.768