Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00567 ATGACATTTCAACGACTTATGGGTATTGCAAAAAGGAGATGTTTGGTTGTTTTTGTGATTCTCATATGTGCTTCTTTAGCAACTTGCTTTAAGGACCATGAGGAAGAGGAACTGATTCTGAGCCAACTAGCTGACCCAATTACTGGGGATGTCAATATAGAGATGGCTGAGCTGTTATTGGTGAAGTGCAACTTGGATTTCTTTCAGTTGAATGAAGATGTAGATGGTACTGATTCGTGCTCTGAAGAAAAACCGAGAAGCACAGATGGAATTAATTTCGAATGCCGAACGCTTGCAAAAGAAAAAACAAACAGAATGCTAAGTTCCATGCATCCCCAGATGAAGCAGGCTCTTTTAGATTGTGTAAGAAAGAATTTTCATGTCTCCGGGAGAGACTATAATTCTGAAGCTTGGTACACCCGATATCTGGAGTCATTGCTTTTTATGCCTGGTAGTTTTAGAAGGAAGTTAAGTTCTAGATGGCTTCGAAGTGCTGAAGAAGAGCCCGCTCTGGCACCTGAGTCTTCAGATCCTGTATCTCCGCCCCGTCCTAAAAGAAAACCATTTTTTCCACCAGATTCTGGAAATTCAAGTCGATCTTCAGGAGATGAAACTCCTGTAAGAAAAGCTTCTAGCACAGGTGGACAAAAGGAAAAGAAATCTAATCATCAGCAAACAGTTATTTTAGCTGTTGTCATAACAGCAACAGTGACTTTTATTATTGTAGCTTTGCTCTTTTTATGCTATAATAAGAGTGTTTCCAGAATGAAGCAAAATGATGAAAATCATGAAAGGCCTCTCCTAAGCTTGAGCTTAAGTTCTTCGCCCAAGTATTCTGCCTTTGGGAATTCTATTAAGGAAGACGCGCTCATCAATCAAGCATCTAACTTGAATCACCACCAGAGAGCTCCATCTTTGGATGGTAACCTGCACATTGTCTCCGATGGTGCACATACCTCAATGCAGGGACATCCAGCTTTTGGAGATGCTGGAATTGCCAATAACGCATCTTTTGAATCAACTTATATGGCTGATGGTACTACTGGCTTGGTGCCACTTCCTCCTGGAGCAGTGCCAGTCAACTCAGAGATTATACCACCTCTGAAGCCCCCTCCTGGCAGGGCTATTCCCCTTCCTCCCGGCAGGACTGTTCCCCTGCCTCCTGGCAAGAGTGTTCCCCTGCCTCCTGGCAAGAGTGTTCCCCTGCCTCCTGGCAGGGCTGCTGCTCCCCTTCCTCCTGAGCCCCCTTCGTCCTTTAAGTCACCATCCAGCATGAGTAGTTCTCCTCCTCCTCCACCTCCTGCACCTGGTGCTCCACCACCAGGACCTCCTGGAAATTCAGGTCGCCCTCCTGGACCCCCTCTACCTCCAGCTTCTGGACCAGGCAACAAAGCAGGCCCTCCCCCACCACCACCTCCTAGAGGTGGTGGTGGTAGTGGTCCACCTCGACCACCACCTCCAGGAGCACCCAAAGGTGTAAATCCACCTCGACCTCCAAGACCTTTTGGACGTGATGATGAAGGTATGGATGAATCGGGTGTTCCCAAAGCCAAATTGAAACCATTTTTCTGGGACAAAGTTCTTGCAAACCCTGATGATTCCATGGTCTGGCATCAGATAAAAGCAGGATCTTTCCAATTCAACGAGGAGATGATAGAAACTCTTTTTGGATATACACCAGTTGATAAAAACAAAAGTGAGGGAAAGAAGGAGGCATCATCACAAGATCCTGCGCACCAGTTCATTCAGATCATTGATTCAAAGAAAGCACAAAATTTGTCCATTCTTTTGCGGGCACTAAATGTGACAAAAGAAGAAGTTTGTGATGCGCTTCATGAAGGAGCTGAACTTCCTGCCGAACTTCTTGAAAACTTACTGAGGATGGCACCAACACCAGAAGAAGAACTCAAGCTTAGACTGTTTAGTGGGGAACTTACTCAACTTGGAAATGCCGAGCGTTTCCTTAAAAGTTTGGTTGATATCCCATTTGCTTTCAAAAGGTTGGAATCGCTACTTTTCATGGGCACTCTCCAGGAGGACATCACCATCACTAAGGAGTCCTTTGTTAACTTGGAGATTGCTTGCAAGGAACTTCGGAGCAGCAGGCTGTTCCTCAAACTTCTAGAAGCTGTTCTTAAGACGGGAAACCGGATGAACGATGGAACTTTTCGAGGTGGTGCACAAGCATTCAAATTGGACACTCTTTTAAAATTGTCAGATGTGAAAGGAAAAGATGGCAAGACTACGCTATTGCACTTTGTAGTCCAGGAGATAATTCGTACAGAAGGGATAAGAGCTGCGCGGAACGCCACAGGAAGCCATAGCTCCTCGAGCACCACATCAAATGATCTGCTGGATGAAACACCTGACGATGTGGAAGAGCATTACCGTACCCTCGGTCTTGAGGTCGTCTCAGGGTTAAGTGGTGAACTTCAGAATGTGAAGAAAGCAGCAACCATAGATGCTGATGCCTTAACTGGAACTGTTTCCAAACTTGGGCATGCACTCTTAAAATCAAGAGACTTTCTGAACAAAGACATGCAGGGTTTAGGTGAGGAGAGTCAGTTTCACGAAACCCTGAAAAGCTTTTTGCAGAATGCTGAGGTTGCTATCATGGCCCTCTTGGCAGAAGAAAAAAAAATCATGGAAATGGTGAAAAGCACAGGTGACTACTTCCATGGAAATGCAGGGAAGGACGAGGGCTTACGGTTGTTCGTAATAGTGCGAGATTTCTTGGTAATGATAGATAAAACATGTCGAGAAATAAAGGATGCACAGAAGAAGCAGATGAAGGTACAAAAACAGGCAGTATCTTCTGATAGCAATCACCCCCCTTCAACTCCAGTTCCCTCTGATCCTCCTGCTGATCTTCCCCCTGTTCCTCCCGCTGATCGCCCCCCCGTTCCTCCCGCTGATTTTCCCCCTTCAACACCAGTTCCCTCTGATCTTCCCTCTGATCGTCCCCCCGTACCTCCTGCTGATCTTCCCCCTTCAACTCCAGTTCCCCCTGTTCCTCCCACTGATCTTCCCCCTTCAACTCCAGTTCCCTCTGCTCCTCCTCCCCCTTCAACTCCGGTTCCCTCTGCTCCGCCTCCCCCTTCAACTCCAGCTCCCTCTGCTCCTACTCCCCCTTCAACTCCAGCTCCCTCTGCTCCTCCTCCCCCTTCAACTCTAGCTCCTTCTGCTCCTCCTCCCCCTTCAACTCCAGCTCCCTCTGCTCCTCCTCCCCCTTCAACTCTAGCTCCCTCTGCTCCTCCTCCCCCTTCAACTCCAGCTCCCTCTGCTCCCCCTCCCCCTTCAACTCCAGCTCCCTCTGCTCCGCCTCCCCCTTCAACTCCAGCTCCCTCTGCTCCTCCTCCCCCTTCAACCCCAGCTCCCTCTGCTCCTCCTCCCCCTTCAACCCCAGCTCCCTCTGCTCCTCCTCCCCCTTCAACTCCAGTTCCCGCTGCTCTTCCCCCTGTTCGTCCCCCTGATCTACGACACACGCCTTCTGCCGATCTGAATCAACTGATCTTCCCAGCAATTACTGATCGTAGGATCAGTGACTCAAGTTCAGATGAGGAGAGTCCATAG 3573 48.33 MTFQRLMGIAKRRCLVVFVILICASLATCFKDHEEEELILSQLADPITGDVNIEMAELLLVKCNLDFFQLNEDVDGTDSCSEEKPRSTDGINFECRTLAKEKTNRMLSSMHPQMKQALLDCVRKNFHVSGRDYNSEAWYTRYLESLLFMPGSFRRKLSSRWLRSAEEEPALAPESSDPVSPPRPKRKPFFPPDSGNSSRSSGDETPVRKASSTGGQKEKKSNHQQTVILAVVITATVTFIIVALLFLCYNKSVSRMKQNDENHERPLLSLSLSSSPKYSAFGNSIKEDALINQASNLNHHQRAPSLDGNLHIVSDGAHTSMQGHPAFGDAGIANNASFESTYMADGTTGLVPLPPGAVPVNSEIIPPLKPPPGRAIPLPPGRTVPLPPGKSVPLPPGKSVPLPPGRAAAPLPPEPPSSFKSPSSMSSSPPPPPPAPGAPPPGPPGNSGRPPGPPLPPASGPGNKAGPPPPPPPRGGGGSGPPRPPPPGAPKGVNPPRPPRPFGRDDEGMDESGVPKAKLKPFFWDKVLANPDDSMVWHQIKAGSFQFNEEMIETLFGYTPVDKNKSEGKKEASSQDPAHQFIQIIDSKKAQNLSILLRALNVTKEEVCDALHEGAELPAELLENLLRMAPTPEEELKLRLFSGELTQLGNAERFLKSLVDIPFAFKRLESLLFMGTLQEDITITKESFVNLEIACKELRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGKDGKTTLLHFVVQEIIRTEGIRAARNATGSHSSSSTTSNDLLDETPDDVEEHYRTLGLEVVSGLSGELQNVKKAATIDADALTGTVSKLGHALLKSRDFLNKDMQGLGEESQFHETLKSFLQNAEVAIMALLAEEKKIMEMVKSTGDYFHGNAGKDEGLRLFVIVRDFLVMIDKTCREIKDAQKKQMKVQKQAVSSDSNHPPSTPVPSDPPADLPPVPPADRPPVPPADFPPSTPVPSDLPSDRPPVPPADLPPSTPVPPVPPTDLPPSTPVPSAPPPPSTPVPSAPPPPSTPAPSAPTPPSTPAPSAPPPPSTLAPSAPPPPSTPAPSAPPPPSTLAPSAPPPPSTPAPSAPPPPSTPAPSAPPPPSTPAPSAPPPPSTPAPSAPPPPSTPAPSAPPPPSTPVPAALPPVRPPDLRHTPSADLNQLIFPAITDRRISDSSSDEESP 1190
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3586045 3592783 + Carg05652-RA Car16g00567 163719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00567 1190 MobiDBLite consensus disorder prediction 175 189 - -
Car16g00567 1190 MobiDBLite consensus disorder prediction 926 1190 - -
Car16g00567 1190 Pfam Formin Homology 2 Domain 515 914 IPR015425 -
Car16g00567 1190 MobiDBLite consensus disorder prediction 364 515 - -
Car16g00567 1190 MobiDBLite consensus disorder prediction 364 499 - -
Car16g00567 1190 MobiDBLite consensus disorder prediction 500 514 - -
Car16g00567 1190 MobiDBLite consensus disorder prediction 166 223 - -
Car16g00567 1190 MobiDBLite consensus disorder prediction 946 1159 - -
Car16g00567 1190 Coils Coil 915 935 - -
Car16g00567 1190 MobiDBLite consensus disorder prediction 193 223 - -
Car16g00567 1190 MobiDBLite consensus disorder prediction 931 945 - -
Car16g00567 1190 ProSiteProfiles Formin homology-2 (FH2) domain profile. 509 941 IPR015425 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car09g00837 Car16g00567 CCT
Car09g00837 Car16g00567 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00964 Car-Chr10:9110351 Car16g00567 Car-Chr16:3586045 5.01E-110 dispersed
Car16g00567 Car-Chr16:3586045 Car20g00517 Car-Chr20:2854019 5.21E-167 dispersed
Car16g00567 Car-Chr16:3586045 Car02g00124 Car-Chr2:737857 0 wgd
Car16g00567 Car-Chr16:3586045 Car09g00837 Car-Chr9:5101705 8.09E-06 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00567 - - cmos:111446349 835.869