Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00569 ATGAAAGTTTTTGAAGTTTGGAGAAAAATGCCAACAGTTTGGTGGTTTTCTTTGAAAAAGTCCTTCCCCTGCAAACCAGAGCCATCAGAAGTCTATGATCCAAAGAGCAGGAAACAACTTAACACAATCACAACCAAGAAAGCAGCCAATAAGTCAGGGTGTTCTTCTGGAAGATCAGGTTGTTCAAGGTCCATAGCAAATCTCAAAGATGTCATCCATGGAAGCAAGAGACACATGGAGAATCCACCGATTTGTAGCCCGAGATCGATCGGTAGCAGCGAGTTTCTCAACCCGATTGCTCATGAAGTAATACTCAGCAACTCTAAGTGTGAGCTCAAGATCACTGGTTTTGGTGGCTTCCACTTAGAGGGTGTGGGAAATTCTGGCTTTGGAGGAGGTGGGGGCGGAGATTCGCCGTTTTTTGGTACTCTTAGGCCCGGAACTCCCGGTCCGGGGGAGAACTTTGCTATCAACTCCAACTCCATGACTTCTGCAAGAAAGCTTCCTTCTCCTTTATCTTATAGGGATGCCTCTCCAGCTGGGAGTGCTGCCAAATTTAAGGGGGGTGGGGAAGTTCATACAAGCAAAAGGTTCTCGCCGTTAACCAAGTCGAACGATACGACGTTTTCGGCAGTTACTTGCCATAAATGTGGAGAACAGTTCTGCAAATTGGAGGCTGCTGAGTCTCACCATCTCTCCAAGCATGCTGTTACTGAGCTTGTGGAGGGCGATTCATCGAGGAAAATCGTCGAAATGATATGTCAAACTAACTTTTCAAAGTCGGAGAACAATGGAAACCGAATCGAACGAGTTTTCAAAGTTCACAATATGCAGAAAACATTAGCAGGATTTGAAGAATACAGAGAAACAGTGAAGATCAAAGCAAGCAAGCTCTCAAAGAAACACCCTCGATGCCTCGTCGATGGGAACGAGCTATTGAGGTTTTTCGGGACGACGTTAGCCTGCTCACTTGGACTAAATGGCTCCACCAGCCTCTGCATATCACAGAAATGCAATGTCTGCAGAATCATAAGGAATGGTTTCTCAGAAAAGAAGGATATGAAAGAAGTAGGAGTTTTTACGACTTCAACGAGCGGAAAAGCTTTCGAAACCATCGAAACGGAGAAGGAAAGCTCGGTGAAGAAAGCATTGATAATCTGTAGAGTGATAGCTGGGAGAGTTCATAGGCCATTGGAGAACATACAAGATATTGTTGGGCAAACAGGGTTTGATTCTTTGGCTGGCAAAGTGGGATTACATTCCAACATTCAAGAGCTTTATTTGCTTAATCATAGAGCTTTGCTTCCTTGTTTTGTTGTAATTTTCAAACCATGA 1335 44.27 MKVFEVWRKMPTVWWFSLKKSFPCKPEPSEVYDPKSRKQLNTITTKKAANKSGCSSGRSGCSRSIANLKDVIHGSKRHMENPPICSPRSIGSSEFLNPIAHEVILSNSKCELKITGFGGFHLEGVGNSGFGGGGGGDSPFFGTLRPGTPGPGENFAINSNSMTSARKLPSPLSYRDASPAGSAAKFKGGGEVHTSKRFSPLTKSNDTTFSAVTCHKCGEQFCKLEAAESHHLSKHAVTELVEGDSSRKIVEMICQTNFSKSENNGNRIERVFKVHNMQKTLAGFEEYRETVKIKASKLSKKHPRCLVDGNELLRFFGTTLACSLGLNGSTSLCISQKCNVCRIIRNGFSEKKDMKEVGVFTTSTSGKAFETIETEKESSVKKALIICRVIAGRVHRPLENIQDIVGQTGFDSLAGKVGLHSNIQELYLLNHRALLPCFVVIFKP 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3597167 3598716 + Carg05654-RA Car16g00569 163721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00569 444 ProSitePatterns Zinc finger C2H2 type domain signature. 214 235 IPR013087 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car09g00835 Car16g00569 CCT
Car04g00864 Car16g00569 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00864 Car-Chr4:4978981 Car16g00569 Car-Chr16:3597167 0 dispersed
Car16g00569 Car-Chr16:3597167 Car16g00829 Car-Chr16:5472356 1.58E-169 dispersed
Car03g00459 Car-Chr3:4984494 Car16g00569 Car-Chr16:3597167 3.17E-40 transposed
Car16g00569 Car-Chr16:3597167 Car03g00458 Car-Chr3:4984175 6.12E-17 wgd
Car16g00569 Car-Chr16:3597167 Car09g00835 Car-Chr9:5096028 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00569 - - csv:101213316 734.947