Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00572 ATGGATTCTCATCAACTGTTTGGATTTGGAGTCAATAGTGCAGGTGTTTCTTGTACTCCTTATTCCTCTATTCCATCTTTACCTAATACCTTGCTTGGACCCTTGAAATTTAGTGTTAGAAATTCCCCGGCCTCTTCTTCGTTTTTTTCGTCGTCGTATTTTGAATTGGATTCATTTCGGGCGACTACGGTGAGTGATAATCAAGATCAGAGGAACTCCCCTGAGAATCTCTCTGGACTTAGTCCTTCTTGTAATTCGTCGTTTGAAACAAATAGTTTTAATCAAATAGCGTCGTCGAATTTGGATCCGGTGTCGAATGTGTTTGTTTACGATGGATGCTCAAACGAGAATATAAGCTACACGTTGAAACAATTGGAGAGTGTTCTTATGGGGCCGGATAATGAGGAAGTTGTGAGTAAGCCTGATGCTTCGTTTGGAGATAGTAGCAGGCCACAGATTATGGGGCAGAGGTCCTACTCATGGAGCCAAGAACGACAGGGCGGGTTGAATCTTGTACAGTCTCAGATGTTGCCGGTGTCGGTAAGCCAGCGATCTCAAGCAGTTCACTTGGGGAAGCGTCAAAAATCGATGGATGAATCGATATTGCAGCAGGGAGGATTTCCATATGATAATTTGAAGGAGTTGCTGATTGAGTGTGCAAGAGCTTTAGCTGAAAACAGGATGGAGGATTTTGATAACTTGGTTGCCATAGCAAGAGGTGCTGTGTCTATCAGCGGAGAACCGATCCAGCGTCTCGGTGCTTACATGGTGGAAGGGTTGGTGGCAAGGAAAGAGGAGTCGGGGGCAAATATATACCGTGCTCTAAACTGTAGAGAGCCTGCAAGTGATGATTTGCTATCTTATATGCATATGCTATATGAAATCTGCCCTTACTTGAAGTTCGGTTACATGGCAGCTAACGGGGCGATTGCCGAAGCCTGCAGAAACGAAGACCGCATCCACATTATAGACTTCCAGATTACTCAGGGTACACAGTGGTTAACTCTTCTTCAGGCACTTGCAGCAAGGCCTGGTGGTGCTCCCCATGTGAGAATAACTGGTATCGACGATCCTGTTTCTAAGTATGCCCGTGGTGAGGGGTTGGAGGTCGTTGAGAGGCGGTTGGCTGAAGTCTCAAGGAAGTATGGAATACCAGTAGAGTTTCATGGATTACCCGTTTTTGCTCCAGACGTCACGCGTGGTATGCTTGATATCAGACCCGGGGAGGCTCTGGCTGTAAACTTCCCCTTGCAACTTCATCATACCCCAGACGAAAGCGTCGACGTAAACAATCCACGGGACGGTTTGCTGAGAATGGTGAAGTCATTGTCCCCAAGGGTAGTAACTTTGGTAGAGCAAGAATCCAACACCAACACAACCCCTTTCTTCAACAGGTTTGTGGAAACTATGGATTACTACTTGGCAATCTTCGAGTCCATTGATGTCACTCTACCAAGGAACAGCAAGAAGGGTATCAACATCGAGCAGCATTGTTTGGCGAAAGATATCGTTAACGTCATCGCTTGCGAGGGGAGGGAACGAGAAGAACGCCACGAGCTCTTCGGCAAGTGGAAAACAAGATTGACAATGGCAGGGTTCTGCCAGTTCCCTTTGAGCTCTTACGTCAACTCCGTCATCAGGAGCCTGCTCAGGTGCTATTCGGAGCATTACACTCTCGTCGAAAAAGATGGAGCAATGCTGTTGGGATGGAAAAACAGGAACCTGATATCTGCCTCGGCCTGGTATTGA 1749 46.77 MDSHQLFGFGVNSAGVSCTPYSSIPSLPNTLLGPLKFSVRNSPASSSFFSSSYFELDSFRATTVSDNQDQRNSPENLSGLSPSCNSSFETNSFNQIASSNLDPVSNVFVYDGCSNENISYTLKQLESVLMGPDNEEVVSKPDASFGDSSRPQIMGQRSYSWSQERQGGLNLVQSQMLPVSVSQRSQAVHLGKRQKSMDESILQQGGFPYDNLKELLIECARALAENRMEDFDNLVAIARGAVSISGEPIQRLGAYMVEGLVARKEESGANIYRALNCREPASDDLLSYMHMLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQITQGTQWLTLLQALAARPGGAPHVRITGIDDPVSKYARGEGLEVVERRLAEVSRKYGIPVEFHGLPVFAPDVTRGMLDIRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRMVKSLSPRVVTLVEQESNTNTTPFFNRFVETMDYYLAIFESIDVTLPRNSKKGINIEQHCLAKDIVNVIACEGREREERHELFGKWKTRLTMAGFCQFPLSSYVNSVIRSLLRCYSEHYTLVEKDGAMLLGWKNRNLISASAWY 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3613089 3614837 + Carg05657-RA Car16g00572 163724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00572 582 Pfam GRAS domain family 212 581 IPR005202 -
Car16g00572 582 ProSiteProfiles GRAS family profile. 203 582 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car09g00833 Car16g00572 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00572 Car-Chr16:3613089 Car20g00575 Car-Chr20:3226120 1.15E-176 dispersed
Car16g00572 Car-Chr16:3613089 Car07g00624 Car-Chr7:3142947 1.25E-174 wgd
Car16g00572 Car-Chr16:3613089 Car09g00833 Car-Chr9:5076543 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4938 PF03514 GRAS 8.30E-126 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00572 - - csv:101216606 972.615