Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00582 ATGGACCCACCAATCAGACATATACGTACCCATGAACCTGGCCTTCAATTAGCACAAGCTCATGCTGCAGAAGCTACAGAGGAAAAGGAGCTGAGTGTCACGGCTAGAGGCTTGACCGTACGTCGCTTGGCCGTAGGCGACGCAAGAACAAATTGGCTTAACTCACTTGTCGCTGGAAAGCTCTCGTCGCACACTGTGCGGTGCCCTTTAACTGAAATTGTAGCAAAGCCGAACGAAACCCAATGCAGAATGGGTAATCTTCCTCTGCTATCTTTTGTTATGACCCTGTTCTTATATTCATCTTTCAATATCTCATCGGCTGTTGATTTCTTAACCCCTTCTCAAACCCTCAGCGATGGCAACACCCTGGTCTCGGAAAATGGGTATTTCGAGATGGGTTTCTTCAGTCCTGGAAATCCCATGAATCGTTACTTGGGAATTTGGTACAAAATCATCCCGATTCCCACTGTGATTTGGGTCGCCAATCGAGAAGCCCCGATCAAGGATCTTCATGGTGTTCTAAGAATCAACACCACAGCCAGTGAAATCACTCTCACCCAGAATGATGATCTTGTTGTTTGGTCAGCAAAATCGTTAAAACCAGTGGAAAATCCCAGACTGCAACTCCTGGATTCTGGGAATTTGGTCCTGAAAAATGGGAACTCGGAGGTGTTCTTATGGGAAAGCTTTGATTATCCAACGGATACATTGTTGCCAGGAATGAAGCTGGGATGGGATTATAAAACTGGCTTGAACAGAAGATTATCCGCTTGGAAAAACTGGGACGACCCATCTCCTGGAACATTGACCATGGAAATGGAGAATCATAGCTACCCAGAACCCGCCATGTGGAATGGTACTCAAGAGTTCATGAGATCCGGACCTTGGAATGGGATTCGATACAGCGCCAAACCCTTCACCGCTTTCCCAATTTTCGTCTTCCATTACACGAAGAACAAAGATGAGGTTTATTACAGCTACCAGTTGATTAATCAATCAATGATTGGAAGAATGGTGTTGAATCAATCCAAGTTCAAGAGAGAGGCTCTGTTGTGGTCGGAAGCTGAGAAGAACTGGAAGGTATACGCCTCAATACCGAGGGAGTACTGCGATACGTACAATTTTTGTGGTGCTTTTGGGAGCTGCAACATTGAGAGCATGCCTTCTTGTAAATGTTTAAAAGGGTTTAAGCCAAAGGTGCCTGAGAGATGGAATTTGATGGATTATACAGAAGGGTGTGTTAGAAATAGGCCTCTTAATTGCTTGGATGAAGTGGGGTTTGCTAAGTTTGTGGGGATGAAATTGCCTGACACTAAATTTTCTTGGGTTAATGAAAGCATGAGGTTAGATGAGTGCAGGGAGATGTGCTTGAGGAATTGTTCTTGTATGGCGTTTGCTAATACTGATATTAGAGGATCAGGCAGTGGTTGTGTCATTTGGGTTGGTGAGCTTGTTGATATTCCTGTGATTCTTAAAGGTGGACAAGATTTGTATGTTAAAGTACTTGCTTCTGAGTTAGGTATGAGCCTTACGTGTTTTAGAAACCTTGAGGGGAAGCCCGAAAGGGAAAGCTTAAAGAGGACCGTATCTGCTAGCGGTGGGCTTGAGCTGTTACAAATGGTATCAGAGCCAAACACCGGACTATGTGCTAGTGATGAGGCTAAGCTCCAGGAGATGGACACAAGGTGGTTTGCCAGCAAGGATGCTGGCCCCAAAAAGGAGTGGATTGTGAGATCCCACGTCGAGACAAAGAAGAAGAGCTCGTTGACCATAGTTGTAGTTTTAGCTGCTGCTCTCATTGTTGCTGCCCTGCTTTTGGTCGGATTTTACGTTGTTCGAAGCAGGAAACACCTCAGAGGTAAGAAGCTTGAAGTGCAAGAGGAAAGCATGGAGCTTCCATTATATGACTTATCAACAATATCACATTCGACAGACAATTTCTCAAACTCCAACAAGCTTGGAGAAGGCGGTTTTGGTGCTGTCTTCTGGGGTAGGCTTCCAAACGGACAAGAAATTGCAGTAAAAAGGCTGTCCAACCAGTCAAGACAGGGCATGGATGAGTTCATGAATGAAGTAAAACTTATAGCCAAACTTCAGCACAGAAACCTTGTAAAGCTTCTGGGTTGCTGCATTCAAGGGGAAGAAAAGATGTTGGTCTATGAATACATGCCTAATAACAGCTTGGATTCCTTCATATTTGATTTGGCGGGAAGGAAGCTTTTGGATTGGTCGAAGCGATTCAACATCATATGTGGAATAGCGAGAGGGATTCTTTACCTTCATCAAGATTCTAGATTGAGGATTATACATAGAGATCTCAAACCGAGTAATATCTTGCTTGATACTGATATGATCCCGAAAATCTCGGATTTTGGAATGGCTAGAACTTTTGGTGGCGATCAGATTGAAGGAAACACTAAGAGAGTAGTTGGAACCGGGTATATGGCACCGGAATACGCTATCAATGGACAATTTTCTATCAAGTCTGATGTATTCAGCTTTGGGGTTTTAGTGTTGGAGATTATAAGTGGAGAGAAAAATAAGGGGTTTCATCGTTCAAATCACGCTCTCAATCTTATTGGTCATGTATGGAGATTATGGAAGGAAGGAAGACCATTAGAGTTTATTGATACATCCATTACGAACTTGTACGCTCCATCTGAAGTATTGCGATGCATCCATATTAGCCTTCTGTGCTTGCAAAAACATCCCGAGGATAGACCGACTATGTCAAATGTGGTTCTAATGCTAAGTAGTGATGGTGCGTTGGTGCAACCGAAACAACCTGGATTATACGTTGAAGGAGACTCACTTGAAGCCCGTTCTTTTTCAAATGAAAATGAATTTCTTACTACTAATGAGTTAACTATTACCCATTTGGAGGCGAGATAA 2892 43.46 MDPPIRHIRTHEPGLQLAQAHAAEATEEKELSVTARGLTVRRLAVGDARTNWLNSLVAGKLSSHTVRCPLTEIVAKPNETQCRMGNLPLLSFVMTLFLYSSFNISSAVDFLTPSQTLSDGNTLVSENGYFEMGFFSPGNPMNRYLGIWYKIIPIPTVIWVANREAPIKDLHGVLRINTTASEITLTQNDDLVVWSAKSLKPVENPRLQLLDSGNLVLKNGNSEVFLWESFDYPTDTLLPGMKLGWDYKTGLNRRLSAWKNWDDPSPGTLTMEMENHSYPEPAMWNGTQEFMRSGPWNGIRYSAKPFTAFPIFVFHYTKNKDEVYYSYQLINQSMIGRMVLNQSKFKREALLWSEAEKNWKVYASIPREYCDTYNFCGAFGSCNIESMPSCKCLKGFKPKVPERWNLMDYTEGCVRNRPLNCLDEVGFAKFVGMKLPDTKFSWVNESMRLDECREMCLRNCSCMAFANTDIRGSGSGCVIWVGELVDIPVILKGGQDLYVKVLASELGMSLTCFRNLEGKPERESLKRTVSASGGLELLQMVSEPNTGLCASDEAKLQEMDTRWFASKDAGPKKEWIVRSHVETKKKSSLTIVVVLAAALIVAALLLVGFYVVRSRKHLRGKKLEVQEESMELPLYDLSTISHSTDNFSNSNKLGEGGFGAVFWGRLPNGQEIAVKRLSNQSRQGMDEFMNEVKLIAKLQHRNLVKLLGCCIQGEEKMLVYEYMPNNSLDSFIFDLAGRKLLDWSKRFNIICGIARGILYLHQDSRLRIIHRDLKPSNILLDTDMIPKISDFGMARTFGGDQIEGNTKRVVGTGYMAPEYAINGQFSIKSDVFSFGVLVLEIISGEKNKGFHRSNHALNLIGHVWRLWKEGRPLEFIDTSITNLYAPSEVLRCIHISLLCLQKHPEDRPTMSNVVLMLSSDGALVQPKQPGLYVEGDSLEARSFSNENEFLTTNELTITHLEAR 963
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3649898 3655192 - Carg05667-RA Car16g00582 163734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00582 963 ProSiteProfiles Protein kinase domain profile. 647 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car16g00582 963 ProSiteProfiles Bulb-type lectin domain profile. 108 230 IPR001480 -
Car16g00582 963 Pfam D-mannose binding lectin 156 259 IPR001480 -
Car16g00582 963 ProSiteProfiles PAN/Apple domain profile. 421 502 IPR003609 -
Car16g00582 963 ProSitePatterns Serine/Threonine protein kinases active-site signature. 768 780 IPR008271 GO:0004672|GO:0006468
Car16g00582 963 Pfam S-locus glycoprotein domain 292 399 IPR000858 GO:0048544
Car16g00582 963 Pfam PAN-like domain 425 487 IPR003609 -
Car16g00582 963 Pfam Protein tyrosine and serine/threonine kinase 650 915 IPR001245 GO:0004672|GO:0006468
Car16g00582 963 Pfam Domain of unknown function (DUF3403) 918 963 IPR021820 GO:0004674
Car16g00582 963 ProSitePatterns Protein kinases ATP-binding region signature. 653 675 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00465 Car-Chr3:4996480 Car16g00582 Car-Chr16:3649898 9.35E-06 dispersed
Car04g00063 Car-Chr4:335426 Car16g00582 Car-Chr16:3649898 2.35E-81 dispersed
Car07g00242 Car-Chr7:1321089 Car16g00582 Car-Chr16:3649898 0 dispersed
Car13g00564 Car-Chr13:7524607 Car16g00582 Car-Chr16:3649898 1.70E-51 dispersed
Car13g00565 Car-Chr13:7526520 Car16g00582 Car-Chr16:3649898 2.37E-139 dispersed
Car13g00855 Car-Chr13:9121046 Car16g00582 Car-Chr16:3649898 3.55E-98 dispersed
Car14g00601 Car-Chr14:3346716 Car16g00582 Car-Chr16:3649898 5.91E-87 dispersed
Car16g00582 Car-Chr16:3649898 Car18g00312 Car-Chr18:1872334 9.34E-74 dispersed
Car18g00311 Car-Chr18:1868504 Car16g00582 Car-Chr16:3649898 8.49E-39 dispersed
Car12g00937 Car-Chr12:9401016 Car16g00582 Car-Chr16:3649898 2.08E-10 transposed
Car16g00582 Car-Chr16:3649898 Car03g00451 Car-Chr3:4958316 1.10E-27 wgd
Car16g00582 Car-Chr16:3649898 Car09g00824 Car-Chr9:5016207 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89440 PF07714 PK_Tyr_Ser-Thr 6.30E-50 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00582 - - qsu:111987472 931.013