Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00593 ATGGATCTGGAGAGTGCTATTAGGGGTCACTCAATCAAGAAGGATTCTTGGAGAGCTGTTTTAACTTTGGCTTATCAAAGCTTGGGGGTTGTTTATGGCGATTTGAGTACTTCCCCTTTGTATGTTTACAAAAGCACTTTTGCTGAGGATATTGAGCACTCTGAAACTAATGAGGAGATTTATGGGATTCTTTCTTTTGTTTTCTGGACTCTCACGCTTATTCCTTTGATTAAATACGTTTTTATTGTTCTTCGAGCTGATGATAATGGCGAGGGGGGAACTTTTGCTTTGTACTCATTGCTTTGCCGCCATGCCCGAGTTGGCTCCTTGCCTAATTGTCAGCTCGCGGATGAGGAGCTTTCTGAGTATACAAAAGATGGGGTGGATTTAACCACTAAGAACACTTGTGGGTCGAGATTGAAATCGACATTAGAGAACCATAGAGTGCTGCAGAGGGTTTTGCTTGTTCTTGCTTTGATTGGGGCTTGCATGGTGATTGGAGATGGAGTTCTTACTCCTGCCATTTCTGTTTTCTCTGCTGTTTCTGGGCTGGAACTTTCCATGGCTAAAGAACACCATCGATATGTCGAAGTCCCGGTCGCTTGTGTCATATTAGTAATCCTGTTTTCACTTCAACATTATGGAACCCATCGAGTCGGGTTTCTGTTCGCACCGGTTGTAATTACCTGGCTCGTGTGTATAAGTTCGATAGGACTGTACAATATCTTCTACTGGAATCCCCATGTTTATCAAGCACTCTCCCCATATTATATGTACAAATTTTTGAAGAAGACCCAAAGGGGAGGTTGGATGTCCCTGGGCGGCATCCTGTTATGTATGACAGGTTCGGAAGCAATGTTTGCTGATCTCGGCCACTTCTCGCAGCTATCTATCAAGATTGCGTTTTCTTTTGTGGTTTATCCAGCTTTGGTACTGGCATATATGGGACAAGCTGCTTATCTTTCTCAACATCACGGTGAAGAAAGTAACTATCGAATCGGATTTTACGTGTCGGTTCCTGAGAAAATAAGATGGCCTGTACTTGTGATAGCCATTTTAGCTGCGGTGGTCGGAAGTCAAGCTGTCATTACCGGGACGTTTTCGATAATAAAACAGTGCTCTGCGTTAGGCTGCTTCCCAAGGGTCAAAATTGTTCATACGTCGTCGAAAATCCACGGCCAGATTTACATACCAGAGATCAACTGGACTTTGATGATCTTGTGCTTGGCTATTACTGGTGGCTTTCGAGACACGAAACGAATGGGGAATGCATCAGTCATCATCTTGTGCTGGAACAAAAGCTTTCTCTTTGCCATTGCCTTCATACTCATTTTCGGGTTCATCGAATCACTCTACTTCTCGGCATCTCTCATCAAGTTTCAAGAAGGAGCGTGGGTTCCCATTGCCCTCTCGCTCATCTTCCTACTAGTCATGTACGTATGGCAATACGGAACGCGCAAGAAATACGAGTACGATGTTCAAAACAAAGTCTCAATCAACTGGCTCTTAGGCTTAGGTCCAAGTTTAGGCATTGTACGAGTACGAGGCATTGGTCTTATATACACCGAGCTAGTCTCAGGTATCCCCGCCATCTTCTCCCACTTCGTAGCAAACCTCCCGGCCTTCCACCAAGTCCTAGTCTTCCTTTGTGTAAAATCCGTCCCCGTCCCACACGTGAGACCAGGAGAGAGATTCCTCGTAGGAAGAGTTGGACCAAAGGAGTACCGTCTGTATCGATGCATAGCACGATATGGATACCGCGACATCCACAAGGATGGTATCGAGTTCGAGAAGGACCTAGTGTGTAGCATTGCGGAGTTCATAAGGTCAGAGAAGGCGGAGACGAACGTGAAGGTGGAAGATTTGGAAGAGAGCGAGAGAATGACGGTTGTGGGAACGTCGTCGACACACGTAGACGGAGTGAGAATGTGTGAAGATGAAGGAGGAGGAGAGACATCAGAGGTGAGGGAGATAAAGTCAGCACAAAAGGTGAGGAAAAGAGTGAGGTTTGTTGTGCCTGAGAGCCCACAAATGGACGTGGAGGCAAGGAGAGAGCTGGAAGAGCTAATGGAAGCAAGAGAGGCAGGGATGGCTTTCATTATGGGACATTCATATGTGAAGGCAAAGAGAGGGTCAGGTTGGGTGAAGAAAATGGTGATAAATTATGGGTATGATTTCTTGAGAAGGAACTCAAGAGGGCCATCTTATGCTTGGACTGTGCCTCATGCATCTACTCTAGAGGTTGGGATGATCTACCAAGTTTGA 2265 45.65 MDLESAIRGHSIKKDSWRAVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIEHSETNEEIYGILSFVFWTLTLIPLIKYVFIVLRADDNGEGGTFALYSLLCRHARVGSLPNCQLADEELSEYTKDGVDLTTKNTCGSRLKSTLENHRVLQRVLLVLALIGACMVIGDGVLTPAISVFSAVSGLELSMAKEHHRYVEVPVACVILVILFSLQHYGTHRVGFLFAPVVITWLVCISSIGLYNIFYWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGILLCMTGSEAMFADLGHFSQLSIKIAFSFVVYPALVLAYMGQAAYLSQHHGEESNYRIGFYVSVPEKIRWPVLVIAILAAVVGSQAVITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWTLMILCLAITGGFRDTKRMGNASVIILCWNKSFLFAIAFILIFGFIESLYFSASLIKFQEGAWVPIALSLIFLLVMYVWQYGTRKKYEYDVQNKVSINWLLGLGPSLGIVRVRGIGLIYTELVSGIPAIFSHFVANLPAFHQVLVFLCVKSVPVPHVRPGERFLVGRVGPKEYRLYRCIARYGYRDIHKDGIEFEKDLVCSIAEFIRSEKAETNVKVEDLEESERMTVVGTSSTHVDGVRMCEDEGGGETSEVREIKSAQKVRKRVRFVVPESPQMDVEARRELEELMEAREAGMAFIMGHSYVKAKRGSGWVKKMVINYGYDFLRRNSRGPSYAWTVPHASTLEVGMIYQV 754
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3760284 3766100 + Carg05678-RA Car16g00593 163745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00593 754 Coils Coil 605 625 - -
Car16g00593 754 Pfam K+ potassium transporter 25 588 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02620 Car-Chr4:20458498 Car16g00593 Car-Chr16:3760284 0 dispersed
Car05g00002 Car-Chr5:9120 Car16g00593 Car-Chr16:3760284 0 dispersed
Car11g01257 Car-Chr11:10436771 Car16g00593 Car-Chr16:3760284 0 dispersed
Car15g00311 Car-Chr15:1680919 Car16g00593 Car-Chr16:3760284 0 dispersed
Car16g00593 Car-Chr16:3760284 Car18g00266 Car-Chr18:1544318 0 dispersed
Car16g00593 Car-Chr16:3760284 Car14g00580 Car-Chr14:3154773 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00593 K03549 - csv:101211664 1365.13