Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00615 ATGAGCATCTTTCACCCCCCTCCTCCGCCGTCCTCCTCCTCCGCCGTGAAGTGGCTCAGCCTAGTCTCCGCCGTCTGGGTCCAATCCATCGCAGGCAACAACTACACCTTCTCCAATTACTCCGCCGCCCTCAAATCCCTCATGAACCTCTCCCAGCTCCAACTCAACAATCTCTCCGTCGCCAAAGACTTAGGCAAAGCCTTTGGCCTCCTTTCCGGCCTCGCCTCCGACCGCCTCCCCCCCTCCCTCCTCCTCCTCATCGGCTCCCTCGAAGGCCTCATCGGCTACGGCGGTCAATGGCTAGTCGTAAGCAAAACAATCAACCCCCTCCCTTACTGGCAGATAAGTATTTTTATGTGCATGGGAGGGAATAGTAGCACTTGGATGAACACCGCCGTGCTCGTTACTTGCCTCAGAAACTTCCGGCGAAGCATAGGCTCTGTTTCCGGCGTTCTCAAAGGCTACGTCGCTCTCAGCACCGCCATTTTCACCGATCTCTGTTTCGCCCTTTTCTCCAATGATCCCTCTTCCTTTCTCGCCCTTCTCGCCGTCGTCCCCTTCGCCGTTTGCCTCATTGCCATTCTCTTCCTCCGTGAAACCCCCTTCGCCGTCGATAACGAAACAGAGGATTCCCAATACTTCTGGGTCCTCAACGCTATCGCCGTCGCCGTCGCCGTCAGTCTCTTGGCCTTTGATTCGATCCCCAATCCCACCTCATCCGTATCGATAATTTTCTCCATTGTGTTATTGATTCTCCTCGTTTCCCCTCTGGTAATCCCAATTCACTCATTCCTCAAGAACAGGGGCCGGTCCGGTGCGGCTGCAGAGGCGTTGTTGGCGGCTGAGGAAGTGGCGGAGGTGGAGGGAAATGGGAATCCGGTGATAGGAGAAGATCACACGATTGTGGAGGCGATGAAGACAGTTGAATTTTGGCTTCTGTTTGTGTCGTTTTTGTTTGGAGTGGGTACCGGATTGGCAGTGATGAACAACATGGGTCAAATCGGATTGGCTCTTGGATACGACGACGTTTCGAGCTTCATCTCTTTGATGAGCATTTGGGGTTCCTTATACATCGGCTCGATCATTGTCGGTATCTGTTACGGTGTTCGTCTCGCCATCAGTGTCCCGATCGCCTCTGAAATTTTCGGGCTCAAAGACTATGGCATGATCTACAACGTTCTGATCTTCAACCTCCCACTCGGTTCGTTCCTCTTCTCGGGGCTGCTGGCCGGGATTCTCTACGACATGGAGGCGACGAAGACAGAGGAGGGTGGGAATACGTGCATGGGAGCGCATTGTTACAGGCTTGTGTTTGTGGTAATGGCTTGTTCATGTGTGGTTGGGCTTGGCGTGGACTTGCTTTTGTTCATTAGAACTAAGAGATTGTACTCCAAAACAAGGGATGGAAGGTGA 1413 53.29 MSIFHPPPPPSSSSAVKWLSLVSAVWVQSIAGNNYTFSNYSAALKSLMNLSQLQLNNLSVAKDLGKAFGLLSGLASDRLPPSLLLLIGSLEGLIGYGGQWLVVSKTINPLPYWQISIFMCMGGNSSTWMNTAVLVTCLRNFRRSIGSVSGVLKGYVALSTAIFTDLCFALFSNDPSSFLALLAVVPFAVCLIAILFLRETPFAVDNETEDSQYFWVLNAIAVAVAVSLLAFDSIPNPTSSVSIIFSIVLLILLVSPLVIPIHSFLKNRGRSGAAAEALLAAEEVAEVEGNGNPVIGEDHTIVEAMKTVEFWLLFVSFLFGVGTGLAVMNNMGQIGLALGYDDVSSFISLMSIWGSLYIGSIIVGICYGVRLAISVPIASEIFGLKDYGMIYNVLIFNLPLGSFLFSGLLAGILYDMEATKTEEGGNTCMGAHCYRLVFVVMACSCVVGLGVDLLLFIRTKRLYSKTRDGR 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3939831 3942009 + Carg05700-RA Car16g00615 163767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00615 470 Pfam Nodulin-like 17 261 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00642 Car-Chr7:3258017 Car16g00615 Car-Chr16:3939831 0 dispersed
Car16g00615 Car-Chr16:3939831 Car15g00079 Car-Chr15:480618 2.40E-81 dispersed
Car16g00615 Car-Chr16:3939831 Car20g00663 Car-Chr20:3738659 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00615 - - cmo:103490296 660.603