Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00633 ATGTTATCGGAGTTGATGAACTTATTGAGGGCCTGTTTTGGGCCAAGCTCCGATCGGTCTGCAGCGGGCGATATCAGGGGGCGACAGGACGGGTTGTTGTGGTACAAAGATAGTGGACACCATTTGAATGGTGAGTACTCAATGTCTGTTGTTCAGGCCAACAATTTGCTTGAAGATCAGAGTCAGATTGAGTCAGGCAGTTTGAGCTCAGATGAGTCTGGTCCCTTTGGGACCTTTGTTGGTGTGTATGATGGCCATGGAGGCCCCGAGACGTCTCGGTATGTCTGTGATCATCTCTTCCAGCATCTCAAGAGATTTACTTCCGAGCAAGATTCTATGTCTGCGGATGTAATACGCAAGGCATTTCAAGCGACAGAAGACGGTTTTCTTTCTATAGTCCGAAGACAATGGTCGACGAATCCACAAATTGCAGCTGTTGGTTCATGTTGTCTTGTTGGTGTAATATGTAATGGGACTCTCTATATTGCAAATCTAGGTGATTCTCGTGCTGTTTTGGGTAGAATGGTGAAGGCAACCGGTGATGTTATAGCCATTCAGTTATCGATGGAGCATAATGTCGCTAACGAGTCTGTGCGGCAAGAGCTGCAATCTTTGCACCCCGAAGACTCGCAAATTGTGGTTTTAAAGCATAATGTTTGGCGCGTAAAGGGCATAATACAGATTTCCAGATCTATAGGCGATGTCTACTTGAAAAAAGCCGAGTTCAACAGAGAGCCTCTGTATTCAAAGTTTCGAGTTCGCGAACCCTTCAAGAAGCCGATTTTGAGCTCCGAACCAGCCATTTCTGAGACCCAGTTGAAGCCAGATGATCAATTCATTATATTTGCATCAGATGGGTTGTGGGAGCACCTTACCAATCAGGAAGCCGTCAATATTGTTCATAAGCATTCTCAAAGTGGAAGTGCACGAAGACTCGTCAAAGCTGCACTTCAAATAGCTGCAAAGAAGAGAGAAATGAGATACTCAGACTTAAAGAAGATCGACCGCGGCGTTCGTCGCCATTTCCACGACGACATCACCGTGGTGGTTGTGTTTCTCGATTCAAATCTACTCTTCAGAGCCAGCTCCACAAAGAGCTCGAATGTCTCACTACGAGGAGGTGGAGTCAACAACTGGCTCCCTAACTCTTTAGCACCCGTCCCTACGCCGACGTAG 1176 46.6 MLSELMNLLRACFGPSSDRSAAGDIRGRQDGLLWYKDSGHHLNGEYSMSVVQANNLLEDQSQIESGSLSSDESGPFGTFVGVYDGHGGPETSRYVCDHLFQHLKRFTSEQDSMSADVIRKAFQATEDGFLSIVRRQWSTNPQIAAVGSCCLVGVICNGTLYIANLGDSRAVLGRMVKATGDVIAIQLSMEHNVANESVRQELQSLHPEDSQIVVLKHNVWRVKGIIQISRSIGDVYLKKAEFNREPLYSKFRVREPFKKPILSSEPAISETQLKPDDQFIIFASDGLWEHLTNQEAVNIVHKHSQSGSARRLVKAALQIAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLLFRASSTKSSNVSLRGGGVNNWLPNSLAPVPTPT 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 4034763 4038512 + Carg05718-RA Car16g00633 163785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00633 391 Pfam Protein phosphatase 2C 77 317 IPR001932 -
Car16g00633 391 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169
Car16g00633 391 ProSiteProfiles PPM-type phosphatase domain profile. 45 353 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g01184 Car-Chr16:10034965 Car16g00633 Car-Chr16:4034763 1.15E-119 dispersed
Car16g00633 Car-Chr16:4034763 Car19g00585 Car-Chr19:7264932 0 wgd
Car16g00633 Car-Chr16:4034763 Car20g00642 Car-Chr20:3616045 0 wgd
Car16g00633 Car-Chr16:4034763 Car07g00667 Car-Chr7:3388579 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00633 - K01102 csv:101211601 679.093