Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car16g00669 | ATGGCTATGTCTCTGAGCTTTGTCTTTGCTTTGGCTCTTCTTGCCATGGCTTCTGGTGGGTTGTCTCATAAGATTGGCGGCGGTGGCGGCGGAGGTGGTGGTGGTGGGGGTGGTGGGTATTATTTGTATTCACAATTCTATGACCATTCTTGTCCAAGAGCTCAAGAGATAGTGAAGTACATAGTGGGTAAGGCTTTTGCTAAGGATCCTCGCATGGCTGCTTCCTTGCTTAGGCTTCATTTCCATGATTGCTTTGTTAAGGGCTGTGATGCCTCATTGTTGTTAGATAGTAGCGGGACAATAACGAGTGAGAAAAGGTCAAACCCAAACAGAAACTCCGCTCGAGGTTTTGAAGTCATTGACGAGATCAAATCCGCCTTGGAAAAAGAGTGTCCTCGCACCGTTTCTTGTGCTGATATCTTAGCCATTGCTGCTAGAGACTCGACCGTCATAACAGGAGGACCGAGTTGGGAGGTTCCATTAGGGAGAAGAGACTCGAGAGGAGCTAGCCTTAGTGGCTCAAACAACGACATTCCAGCTCCAAACAACACTTTCCAAACCATTCTCACCAAGTTCAAGAGACAAGGCCTTGACATAGTCGACCTTGTCGCTCTCTCAGGAAGTCACACCATCGGAAACTCTCGATGTACTAGCTTTAGACAACGGCTCTACAACCAAACCGGCAATGCCAAGCCCGACCCGTCACTCGATCCGTCATATGCAGCTGAATTGCGCCAACGATGCCCGAGATCAGGGGGCGATCAGAACCTGTTTTTCCTGGACTTAGTCAGCCCGACCAAGTTCGACAACTACTACTTCAAGAACCTTTTGGCTGGGAAGGGACTACTGAACTCGGATGAAGTTCTGTTGACAAAGAACCAACAATCCGCCGAGTTGGTGAAGACATATGCAGAGAATTCGGAGACGTTTTTCGAGCAGTTTGCGAGGTCGATGGTTAAGATGGGGAACATTTCTCCGCTCACGGGTTCGAGGGGGGAGATCAGAAAGCATTGTAGGAGAGTTAACAAAGATTAG | 1035 | 48.7 | MAMSLSFVFALALLAMASGGLSHKIGGGGGGGGGGGGGGYYLYSQFYDHSCPRAQEIVKYIVGKAFAKDPRMAASLLRLHFHDCFVKGCDASLLLDSSGTITSEKRSNPNRNSARGFEVIDEIKSALEKECPRTVSCADILAIAARDSTVITGGPSWEVPLGRRDSRGASLSGSNNDIPAPNNTFQTILTKFKRQGLDIVDLVALSGSHTIGNSRCTSFRQRLYNQTGNAKPDPSLDPSYAAELRQRCPRSGGDQNLFFLDLVSPTKFDNYYFKNLLAGKGLLNSDEVLLTKNQQSAELVKTYAENSETFFEQFARSMVKMGNISPLTGSRGEIRKHCRRVNKD | 344 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 16 | 4236763 | 4238608 | + | Carg05754-RA | Car16g00669 | 163821 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car16g00669 | 344 | ProSiteProfiles | Plant heme peroxidase family profile. | 41 | 342 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Car16g00669 | 344 | MobiDBLite | consensus disorder prediction | 157 | 177 | - | - | |
| Car16g00669 | 344 | ProSitePatterns | Peroxidases active site signature. | 73 | 84 | IPR019794 | GO:0004601 | |
| Car16g00669 | 344 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 201 | 211 | IPR019793 | - | |
| Car16g00669 | 344 | Pfam | Peroxidase | 61 | 306 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car02g00312 | Car-Chr2:2126533 | Car16g00669 | Car-Chr16:4236763 | 4.44E-96 | dispersed | |
| Car03g00891 | Car-Chr3:7086082 | Car16g00669 | Car-Chr16:4236763 | 2.72E-100 | dispersed | |
| Car11g01584 | Car-Chr11:12568065 | Car16g00669 | Car-Chr16:4236763 | 7.92E-99 | dispersed | |
| Car14g00179 | Car-Chr14:843112 | Car16g00669 | Car-Chr16:4236763 | 1.56E-32 | dispersed | |
| Car16g00669 | Car-Chr16:4236763 | Car19g00328 | Car-Chr19:5167788 | 4.06E-107 | dispersed | |
| Car19g00320 | Car-Chr19:5009873 | Car16g00669 | Car-Chr16:4236763 | 3.17E-33 | dispersed | |
| Car20g00038 | Car-Chr20:206365 | Car16g00669 | Car-Chr16:4236763 | 8.09E-49 | dispersed | |
| Car08g01155 | Car-Chr8:7755681 | Car16g00669 | Car-Chr16:4236763 | 2.19E-113 | transposed | |
| Car18g00708 | Car-Chr18:8285597 | Car16g00669 | Car-Chr16:4236763 | 3.00E-81 | transposed | |
| Car19g00872 | Car-Chr19:9061533 | Car16g00669 | Car-Chr16:4236763 | 1.25E-67 | transposed | |
| Car16g00669 | Car-Chr16:4236763 | Car03g00656 | Car-Chr3:5882799 | 0 | wgd | |
| Car16g00669 | Car-Chr16:4236763 | Car04g00711 | Car-Chr4:4118510 | 8.24E-112 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car16g00669 | K00430 | - | csv:101223204 | 585.104 |