Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car16g00675 | ATGGCCGGTTTTTTCCCACTAGGCGGCGGAGGCGGCGGCAGCAGCGGCGGTGAGATTATTCATCCAACCGACGGATTACTTTGGTACAAGAATTATGAGAGCTTCGAAACAGAACAACAGCAACAAGGTGGAGAAGGGTTTGTTTACTCCGGCGAAAATTCGCCGGCGAGATCGTCGCTGGTGATGGTGAGATCCGGCGGAGACGGCGGAGGGAAGGTTATTAGCTGCCAAGATTGTGGGAATCAAGCGAAAAAAGATTGCGTTCATATGCGATGTAGAACATGTTGTAAAAGCCGTGGGTTTTTGTGTGAAACCCACGTTAAAAGTACATGGGTACCCGCCTCCAAACGCCGTGAGCGGCTGATCCGTACTGCCGGCGGTGACTCCAAACGCCCTAGAGACACCCACGCCGCTTCTTCAGGGTTTGAAATAGGGAATTTCCCGGCGGAAGTAAACTCCACGGCGGTGTTCCGATGCACGAACCCACCGGCAACTGATCAATATGCTTATCAAACCGCCGTCCACATCGGTGGCCATATCTTCAAGGGCATTCTTTACGACCACGGCCCTGATCAACACCACCACCACCACCACAACCCACCCATCTCCGCCTCCCCGGACGGCGGAGCCCTCCTCATCACCACCGCCGAGTCCGCCGCACCGCTGGATCCTCCGCCGTCATACCCAGCTCCACTCAACAGCTACATCCCCGCCGGTACGCAATTTTTTCAGCCCCCGACATCTTAG | 747 | 55.69 | MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCTNPPATDQYAYQTAVHIGGHIFKGILYDHGPDQHHHHHHNPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS | 248 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 4281795 | 4282663 | - | Carg05760-RA | Car16g00675 | 163827 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car16g00675 | 248 | Pfam | Domain of unknown function (DUF702) | 74 | 191 | - | - | |
Car16g00675 | 248 | MobiDBLite | consensus disorder prediction | 187 | 209 | - | - | |
Car16g00675 | 248 | MobiDBLite | consensus disorder prediction | 187 | 201 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car07g00399 | Car-Chr7:2030316 | Car16g00675 | Car-Chr16:4281795 | 8.04E-72 | dispersed | |
Car16g00675 | Car-Chr16:4281795 | Car19g00232 | Car-Chr19:2337957 | 7.47E-50 | dispersed | |
Car16g00675 | Car-Chr16:4281795 | Car03g00648 | Car-Chr3:5844979 | 2.13E-25 | wgd | |
Car16g00675 | Car-Chr16:4281795 | Car04g00714 | Car-Chr4:4129188 | 6.00E-104 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4950 | PF05142 | DUF702 | 3.10E-45 | No_clan | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car16g00675 | - | - | bhj:120073083 | 347.821 |