Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00675 ATGGCCGGTTTTTTCCCACTAGGCGGCGGAGGCGGCGGCAGCAGCGGCGGTGAGATTATTCATCCAACCGACGGATTACTTTGGTACAAGAATTATGAGAGCTTCGAAACAGAACAACAGCAACAAGGTGGAGAAGGGTTTGTTTACTCCGGCGAAAATTCGCCGGCGAGATCGTCGCTGGTGATGGTGAGATCCGGCGGAGACGGCGGAGGGAAGGTTATTAGCTGCCAAGATTGTGGGAATCAAGCGAAAAAAGATTGCGTTCATATGCGATGTAGAACATGTTGTAAAAGCCGTGGGTTTTTGTGTGAAACCCACGTTAAAAGTACATGGGTACCCGCCTCCAAACGCCGTGAGCGGCTGATCCGTACTGCCGGCGGTGACTCCAAACGCCCTAGAGACACCCACGCCGCTTCTTCAGGGTTTGAAATAGGGAATTTCCCGGCGGAAGTAAACTCCACGGCGGTGTTCCGATGCACGAACCCACCGGCAACTGATCAATATGCTTATCAAACCGCCGTCCACATCGGTGGCCATATCTTCAAGGGCATTCTTTACGACCACGGCCCTGATCAACACCACCACCACCACCACAACCCACCCATCTCCGCCTCCCCGGACGGCGGAGCCCTCCTCATCACCACCGCCGAGTCCGCCGCACCGCTGGATCCTCCGCCGTCATACCCAGCTCCACTCAACAGCTACATCCCCGCCGGTACGCAATTTTTTCAGCCCCCGACATCTTAG 747 55.69 MAGFFPLGGGGGGSSGGEIIHPTDGLLWYKNYESFETEQQQQGGEGFVYSGENSPARSSLVMVRSGGDGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTAGGDSKRPRDTHAASSGFEIGNFPAEVNSTAVFRCTNPPATDQYAYQTAVHIGGHIFKGILYDHGPDQHHHHHHNPPISASPDGGALLITTAESAAPLDPPPSYPAPLNSYIPAGTQFFQPPTS 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 4281795 4282663 - Carg05760-RA Car16g00675 163827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00675 248 Pfam Domain of unknown function (DUF702) 74 191 - -
Car16g00675 248 MobiDBLite consensus disorder prediction 187 209 - -
Car16g00675 248 MobiDBLite consensus disorder prediction 187 201 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00399 Car-Chr7:2030316 Car16g00675 Car-Chr16:4281795 8.04E-72 dispersed
Car16g00675 Car-Chr16:4281795 Car19g00232 Car-Chr19:2337957 7.47E-50 dispersed
Car16g00675 Car-Chr16:4281795 Car03g00648 Car-Chr3:5844979 2.13E-25 wgd
Car16g00675 Car-Chr16:4281795 Car04g00714 Car-Chr4:4129188 6.00E-104 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4950 PF05142 DUF702 3.10E-45 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00675 - - bhj:120073083 347.821