Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00681 CATGGAACATTAATTACTAACCCCAACTATTTCCGTAACATCATAAGCTTTGTCCACTTGGTAAAGCAATGTCATGACTCCAAACTCATCCCAAAGATCAGATCAAAGCAAGTTCTTGAGTTGAAAATGGATACCCATTTGGAGGAGCTAAGGCAAAGCTTCAGAAATGGAAGAACAAGGAGCTTAGAATGGAGGAAAAAACAGCTGATTTCACTAATTCAGTTCATTCAAGACAAAGAAAACGCCATTTTTGAAGCTCTCTTCCAAGATCTTGGGAAGCATCCTGTCGAAATTTATCGAGATGAGGTTGGAATCGTTCTAAAATCTGCCAACAACGCTCTCTCCTGTTTACACAAATGGATCGCTCCTAAAAAGAAATACGTGCCATTACTGTTCTTCCCAGCAAAAGGGGAAGTTTTGCCTGAGCCATATGGTCTAGTCCTCATAATTTCATCATGGAATTTCCCCCTTTCTTTGGCATTGGATCCGTTAATCGGAGCGATATCAGCAGGCAACACGGCGGTTCTAAAACCGTCGGAGTACGCTCCAGCGTGCTCGTCTCTTCTCGCTGCGACGCTTCCTCTTTACCTCGACGATAAAGCCATCAAGGTCGTGGAGGGCGGAGCTGATATCAGTGAACAGCTTCTGCAGCAGAAGTGGGATAAGATCTTCTTCACTGGTAGTCCAAGCGTAGCTAAGATTGTGATGTCTGAAGCTGCAAAGCATCTAACTCCTGTAACATTGGAGCTTGGGGGAAAGTGTCCTGCAATCTTTGATTACTCCTCTGTTCATTCCAATATGAAGGTAGCTGCTAAGAGAATCGTCGGAGGAAAATGGGGACCGTGTTCGGGTCAGGCGTGTATTGGGATCGATTACTTGCTTGTTGAGGATAAGTTTGCTTCAGAATTGATCGAGTCGTTAAAGCGGGTGTTGAAGAAGTTTTACGGTGAAAACTCGAGAAATTCGACGAGTATAGCTCGGATTGTTAATGAGAAACATGTTGAAAGGATCAGTGATATGCTTAATGACCCTAAGGTTGCTGGTTGTATTGTCCATGGTGGTTTAATAGACAAACAAAAACGCTTCATTGAGCCGACAATATTGTTGAATCCTCCGATCGATGCTAATATCATGACCGAAGAAATCTTCGGTCCCGTGCTACCGATAATAACAGTAAGCGAAGCAGTATTGGACAAAATTGAAGAAAGCATCGAGTTCATCAATGCAAGACCGAAACCTCTAGCTATCTACGCCTTCACAGAAGACGAAACGCTAAAGAAACGGATTATATCCGAAACATCATCAGGAAGTGTCACGTTCAATGATACCATGATTCAGTTTGTGTGCGATTCGCTACCATTCGGCGGTGTCGGCCAGAGCGGTTTCGGGAGTTACCATGGCAAGTATTCTTTTGATGCATTCAGCCATGACAAAGCAGTGTTGCAGAGAAGCTTTTTGATAGAACTCGAGCCACGATATCCACCATGGAACGATTTCAAGCTCAAGTTCATTAGATTGGCATATCGATTCGACTATTTCAGGTTGGTACTACTCCTTTTGGGATTAAAGAAGTAG 1575 43.43 HGTLITNPNYFRNIISFVHLVKQCHDSKLIPKIRSKQVLELKMDTHLEELRQSFRNGRTRSLEWRKKQLISLIQFIQDKENAIFEALFQDLGKHPVEIYRDEVGIVLKSANNALSCLHKWIAPKKKYVPLLFFPAKGEVLPEPYGLVLIISSWNFPLSLALDPLIGAISAGNTAVLKPSEYAPACSSLLAATLPLYLDDKAIKVVEGGADISEQLLQQKWDKIFFTGSPSVAKIVMSEAAKHLTPVTLELGGKCPAIFDYSSVHSNMKVAAKRIVGGKWGPCSGQACIGIDYLLVEDKFASELIESLKRVLKKFYGENSRNSTSIARIVNEKHVERISDMLNDPKVAGCIVHGGLIDKQKRFIEPTILLNPPIDANIMTEEIFGPVLPIITVSEAVLDKIEESIEFINARPKPLAIYAFTEDETLKKRIISETSSGSVTFNDTMIQFVCDSLPFGGVGQSGFGSYHGKYSFDAFSHDKAVLQRSFLIELEPRYPPWNDFKLKFIRLAYRFDYFRLVLLLLGLKK 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 4327933 4330267 + Carg05766-RA Car16g00681 163833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00681 524 Pfam Aldehyde dehydrogenase family 46 480 IPR015590 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01034 Car-Chr2:7222911 Car16g00681 Car-Chr16:4327933 4.15E-120 dispersed
Car02g01035 Car-Chr2:7225063 Car16g00681 Car-Chr16:4327933 1.46E-66 dispersed
Car09g00693 Car-Chr9:4088216 Car16g00681 Car-Chr16:4327933 8.75E-26 dispersed
Car09g00694 Car-Chr9:4095549 Car16g00681 Car-Chr16:4327933 3.42E-108 dispersed
Car09g00701 Car-Chr9:4145628 Car16g00681 Car-Chr16:4327933 2.18E-17 dispersed
Car16g00681 Car-Chr16:4327933 Car17g00339 Car-Chr17:2119106 5.78E-43 dispersed
Car16g00681 Car-Chr16:4327933 Car04g01154 Car-Chr4:6634160 8.16E-150 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00681 K00128 - csv:101221321 816.609