Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00690 ATGGCGTATATGTGCGCAGACAGTGGCAATTTAATGGCAATTGCACAACAAGTGATCAAGCAAAAACAACAGCAGGACCAACAGCAACATCACCTTTCTCCTCTTCTTCCTTGGACTAGTTCCAATCCTTCCCCAACAATGGCTTCTTCTTCTTCTTCTTCTTCTCCTGCTTTCACCTTTGGGATTTCAGGTTCCGCCTTCTCCGACCCGTTTCAGGTCGCCGGAGCTGCTGATTCTACCGACCAGCCTTTTCATTTCTCAAATTTGGAGCACCCTTCCACCGGGTTTAGATTCTTACCTAATTTTGGCGGCGGTGGTGGTGGAGAGTTTGAATCTGATGAATGGATGGACAGTTTAGTCGGCGGTAGAGATTCCACGGATAGCTCCGATCTTCCGTCTGGTTGTGATGGTTATGGTGAGTTTGGTCTATATGGTGCGGAGCCCTTTAATGGCTCTCCGCCGTCTCTGTTCTACCGAGAACTTCTCCCGGAAGGTTCGTACAAGACGAATAGTGTTCTGCCCCCGTTGCCTTCATCTCCACCACCAGTTAAGGATGCTAAAGTAGCTAATTCAATGGCGGGGAGTCTGCAGAAGAATAACGTCGTCGAAAGCTTGTCTAGTGCGCCGGAAATCGACTCCTCTTCGCCGCCGCTTCTGAAAGTCTTGCTCGATTGTGCGCGGCTTTGCGACTCTGAACCTGACCGAGCACTAAAAACTCTTAATCGGATCGGTAAATCGTTACGAGAACATGGAGATCCTGTTGAACGAGTTGCGTTTCACTTCGGTGAGGCTCTTCGGAGCAGATTATCTCCGACGGCAATGAAGAACTGCTTGGTTACAAATGATGGCGACGCTAATTCCGAAGATTTCTTGCTCTCTTACAAAGCTTTGAACGATGCCTGTCCTTACTCGAAGTTCGCACATCTCACGGCCAACCAAGCGATTCTGGAAGCTACACAGACAGCCAGTAAAATTCACATTGTCGACTTCGGAATCGCTCAGGGCGTTCAATGGGCTGCGCTTCTGCAGGCTTTAGCCACGCGAGCCACCGGAAAGCCTATCAAAGTTCGCATCTCCGGAATACCCGCACCATCTCTCGGAGATTCACCGGCGGCATCTCTATGCGCCACTGGCAACAGACTCTCCGAGTTTGCAAAGCTTCTGGAACTGAATTTTGAGTTCGAACCGATTCTAACGCCGATTGAGGACCTAAACGAATCGAGCTTCCGCGTTCAATCGGATGAGGTGTTGGCCGTCAATTTCATGCTTCAATTGTACAATCTCCTCGACGAGGTTCCGACTGTAGTTCATAATGCTCTCTTATTTGCGAAATCGCTGAGCCCTAAAATATTGACTCTCGGCGAGTACGAGGCGAGCTTGAACAGAGTCGAATTCTACAATCGCTTCAAGAACGCATTAAAATTCTACTCCGCCATTTTCGAATCGCTAGAGCCAAACTTGCCGCGAGACTCTCCAGAAAGACACCAGTTAGAGAAACAGTTACTCGGCCGTCGAATCGTTGGCGTAGTTGGATCTGAAGAAGAATCAGGAAGCAAGAGAAGAAGAGTACGCATGGAAGCCAAAGAACAATGGAAGAATTTGCTGGAAAGCTCCGGATTCAAACCTGTAGCACTCAGCCATTACGCCATTAGTCAAGCGAAAATACTTTTATGGAACTACAATTACAGTTCTCTTTACACACTGATCGAATCGACGCCAGAGTTTCTGTCTCTAGCATGGAACGACGTTCCTCTCTTAACTGTATCTTCTTGGCGTTGA 1779 48.34 MAYMCADSGNLMAIAQQVIKQKQQQDQQQHHLSPLLPWTSSNPSPTMASSSSSSSPAFTFGISGSAFSDPFQVAGAADSTDQPFHFSNLEHPSTGFRFLPNFGGGGGGEFESDEWMDSLVGGRDSTDSSDLPSGCDGYGEFGLYGAEPFNGSPPSLFYRELLPEGSYKTNSVLPPLPSSPPPVKDAKVANSMAGSLQKNNVVESLSSAPEIDSSSPPLLKVLLDCARLCDSEPDRALKTLNRIGKSLREHGDPVERVAFHFGEALRSRLSPTAMKNCLVTNDGDANSEDFLLSYKALNDACPYSKFAHLTANQAILEATQTASKIHIVDFGIAQGVQWAALLQALATRATGKPIKVRISGIPAPSLGDSPAASLCATGNRLSEFAKLLELNFEFEPILTPIEDLNESSFRVQSDEVLAVNFMLQLYNLLDEVPTVVHNALLFAKSLSPKILTLGEYEASLNRVEFYNRFKNALKFYSAIFESLEPNLPRDSPERHQLEKQLLGRRIVGVVGSEEESGSKRRRVRMEAKEQWKNLLESSGFKPVALSHYAISQAKILLWNYNYSSLYTLIESTPEFLSLAWNDVPLLTVSSWR 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 4383700 4385478 + Carg05775-RA Car16g00690 163842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00690 592 MobiDBLite consensus disorder prediction 22 53 - -
Car16g00690 592 Pfam GRAS domain family 219 592 IPR005202 -
Car16g00690 592 ProSiteProfiles GRAS family profile. 209 592 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00433 Car-Chr7:2192215 Car16g00690 Car-Chr16:4383700 0 dispersed
Car16g00690 Car-Chr16:4383700 Car04g02872 Car-Chr4:21709645 2.78E-59 dispersed
Car16g00690 Car-Chr16:4383700 Car04g00727 Car-Chr4:4221289 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4956 PF03514 GRAS 1.00E-106 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00690 - - cmos:111435912 991.875