Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00707 ATGTCCGTCGCCAACGCCGATATATCTCCAACTATGTTGGAGTCCTCGACGGTCAGGGATATTCCCGCCCTTGACATCGACAAGTGCAGCCCAGCGGACAGGGCTGAGTGGGTGACAAACCCACCAGAGCCGCCGGGAATTTGGCGAGACCTCCTCAACTCTCTCCGCGACACCATGTTTCCTAATCCGACCAAGCTTTTCTCCCCCAAAAGAAACACCGGAATTGCTCTGCTCGGTACCCTTTTGCAGGCCGTCTTCCCTATCCTCTCGTGGGGCCGGAGCTACAATCTCGCCATGTTCAAACACGACATCTTTTCCGGCCTGACCCTTGCCAGCCTCTGCATTCCCCAGAGCATTGGATATGCAAATCTGGCGAAGCTTGATCCACAATATGGCCTCTATACAAGCATTGTGCCGCCACTGGTTTATGCAGTATTAGGAACTTCAAGGGAAATAGCCATCGGCCCAGTGGCCATAGTATCTCTGCTTTTACCGTCGCTGATCGGGAAAATTCAAGATCCCGCCGCCGATCCACTTGCCTACAGAAACCTCATCTTCACCACCACTTTCTTCGCCGGAATCTTCCAAGCCGCCTTTGGGTTCTTACGGCTGGGATTTTTGGTGGATTTTCTATCACATGCCGCCATTGTTGGGTTCATGGGGGGAGCTGCCATTGTTATTGGGCTTCAACAGCTCAAAGGATTGCTTGGCCTCACTCACTTCACTAACAAAACTGATATCATCTCTGTTTTGGAAGCTGTGTTTGGATCATTCCGCCATGAAAATACTCGGTGGAACCCATTGAACTTCATCATTGGCTGCTCCTTCCTGTCGTTCATCCTCATCACCAGATTATTGCACGGCGTCAAGATCGTAAAACGAGTCCCCGCCGGGCTCAACCCCATCTCCACTCGCCACCTCCAATTCCACAGCCCTCAAATCTCCCAAATCACCACCGCCTCCCTCATCGTCGCCGTTATAGCTCTCACAGAAGCTATTGCTGTCGGGAGATCCTTCGCCTCCATGAAAGGATACACCATTGATGGCAACAGAGAGATGGTTGCCTTAGGCTGCATGAACCTCGCCGGCTCTCTCACTTCTTGCTACACAGCCACCGGCTCCTTCTCCCGGACGGCCGTGAATTTCACTGCCGGTTGCCAGACGGCGGTTTCCAACATAGTAATGGCTGTGACGGTGATGATATCATTAGAGATAATACTAATCTCAATCAAACCTGGGACTGAGATTTTGGGTAAACTCCCTGGAACTGATACCTTTGGTGATATCCATCAATACCCAATGGCCCTCAACACTCCTGGAGTCCTCATCCTCCGTGTTAAATCTTCCTTGCTTTGCTTCGCAAATGCCAACTTCATCAAAGACAGGATTCTGAGGATGATCAGCAATGAAGAAGATGCATCAGGGAAGAGAGCCATTCAATTCCTAGTGATTGATCTCTCAAATTTAATGAACATTGATACTTCTGGAATTGGTTCTCTTGAAGAGCTACAAAATGGTTTGGGAGGCAGTGGAGTAGAGTTGGCCATTGCAAACCCAAAATGGGAAGTGATTCATAAGCTGAGGGTAGCAAATTTTGTTGGGAAGCTGAAAGGGAAGGTGTTCTTGAGTGTTGGGGAAGCTGTGGATGCATGTGTTGCAGCTAAATTGGGAGCCATGATCTAA 1683 49.79 MSVANADISPTMLESSTVRDIPALDIDKCSPADRAEWVTNPPEPPGIWRDLLNSLRDTMFPNPTKLFSPKRNTGIALLGTLLQAVFPILSWGRSYNLAMFKHDIFSGLTLASLCIPQSIGYANLAKLDPQYGLYTSIVPPLVYAVLGTSREIAIGPVAIVSLLLPSLIGKIQDPAADPLAYRNLIFTTTFFAGIFQAAFGFLRLGFLVDFLSHAAIVGFMGGAAIVIGLQQLKGLLGLTHFTNKTDIISVLEAVFGSFRHENTRWNPLNFIIGCSFLSFILITRLLHGVKIVKRVPAGLNPISTRHLQFHSPQISQITTASLIVAVIALTEAIAVGRSFASMKGYTIDGNREMVALGCMNLAGSLTSCYTATGSFSRTAVNFTAGCQTAVSNIVMAVTVMISLEIILISIKPGTEILGKLPGTDTFGDIHQYPMALNTPGVLILRVKSSLLCFANANFIKDRILRMISNEEDASGKRAIQFLVIDLSNLMNIDTSGIGSLEELQNGLGGSGVELAIANPKWEVIHKLRVANFVGKLKGKVFLSVGEAVDACVAAKLGAMI 560
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 4503735 4508284 - Carg05792-RA Car16g00707 163859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00707 560 ProSiteProfiles STAS domain profile. 451 551 IPR002645 -
Car16g00707 560 Pfam STAS domain 432 547 IPR002645 -
Car16g00707 560 Pfam Sulfate permease family 286 406 IPR011547 GO:0016021
Car16g00707 560 Pfam Sulfate permease family 100 285 IPR011547 GO:0016021
Car16g00707 560 ProSitePatterns SLC26A transporters signature. 129 150 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car16g00707 Car-Chr16:4503735 Car04g01189 Car-Chr4:6832847 4.99E-32 dispersed
Car16g00707 Car-Chr16:4503735 Car15g00671 Car-Chr15:3743521 3.15E-137 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00707 K17469 - csv:101213063 586.645