Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00765 ATGAAGCTTCTTCTGCTCCTCTTTCTCCTTCTTCACCTTCATACCCATCTCTCCCTTTCTTCTCACTTGCCTGAATTTCGTGCTCTTCTATCTCTCAAAACCTCCCTCTCCGATGACTCTCACTCGCCGCTTTCCAACTGGGATGCTGCTACTCACCACTGTACTTGGACTGGAGTCGTCTGCGATTTCCGCCGCCATGTCGTCGGCCTTGACCTTTCCGGATTGAATCTCTCCGGCACTCTTTCTCCTGACGTGGGTAGTCTTCGGTTTCTCGCGAATCTCTCTCTTGCGGCTAATCAGATTTCCGGCCCCATTCCGCCGGAGATCTCTGCTATCTCTCCGCTTAAATACCTTAACCTCTCTAACAATCTGATTAATGGAACCTTCCCTTTGCAACTCTCCTTCCTTAAGAATCTGGAGGTTCTTGATTTGTATAACAATAATATGTCTGGGAACTTGCCGCTTGTGGTCATTGAGTTGCCGAATCTTCGCCATTTGCATCTCGGTGGGAACTTCTTCTCCGGTGTGATTCCGCCGGAGTATGGAACCTGGCAGTTCATGGAGTACTTGGCTGTTTCTGGAAATGAGCTTCAAGGTCGGATTCCGCCGGAGATTGGTAATTTAACGAGGCTTCGTGAACTTTATATTGGGTATTACAATACCTACGATGGCGGTTTGCCGCCGGAGATCGGAAACTTATCGGAGCTGGTTCGATTGGATGCGGCAAACTGTGGGTTAATGGGTGAGATTCCTCGCGAACTTGGAAAACTAAGGAAATTGGATACTCTGTTTCTTCAGGTGAATGGGTTTTCTGGGCCTTTGATTCCAGAGCTTGGGAGCTTAACCGAGTTGAAATCCATGGATTTGTCTAACAACATTCTTGTTGGGGAGATTCCGGACTCGTTCTCTCAACTCAAGAACTTGACGCTTTTGCATCTGTTCAGGAATAAGCTTCATGGAGCTATTCCACAGTTCATCGGTGAGTTAACGGAGCTGGAAGTGTTGCAGTTGTGGGAAAATAACTTCACTGGCTCTATTCCTTGTAATTTGGGGAAGAATGGCAAGCTTGTTGTTCTTGACATTTCGTCGAACAAGTTGACTGGAACTTTACCTCCCGATATGTGCCATGGAAACCGGCTTCAAACTCTGATTACCCTCGGGAATTTCTTGTTCGGTCCAATCCCTGAATCTCTCGGTCGATGCGAATCATTGAGCCGTATTCGAATGGGGGAAAATTTTCTCAATGGTTCGATTCCGAAGGGTCTGTTCAGTCTGCCAAATCTTACCCAAGTTGAGTTGCAGAACAATTTCCTCACCGGAGAGTTTCCGGTCACTGATTCTGTCTCAGCCAATCTCGGCCAAATTAGTCTCTCAAACAATCGCCTCTCGGGATCCCTTCCACCGATGGTTGGAAATTTCTCCGGTGTCCAGAAGCTTCTACTCGATGGGAATAAATTCTCCGGCCAAATCCCACCTGAAATCGGACGATTACAGCAGTTATCAAAGATCGATTTCAGCCACAACAAATTCTCCGGCCAAATCGCCCCTGAAATCAGCCAATGTAAGCTCTTAACCTTCGTCGATCTCAGTCGCAACGAACTCTCCGGTGAGATTCCGAATGAAATCACCACAATGAGAATATTGAACTATCTGAATCTCTCAAGAAATCACTTAATCGGAAGCGTCCCTGCTTCAATATCCTCAATGCAGAGCTTAACATCCGTTGATTTTTCATATAACAATCTCTCCGGTTTAGTTCCGGGCACCGGCCAGTTTAGCTACTTCAACTACACCTCATTCCTAGGCAACCCAGATCTCTGCGGTCCATACTTAGGACCTTGCAGAAATGGCGTCGACAATGGCACTCACCCCCCTCATTTAAAACCCTCACTCTCTGCCTCTGTTAAGCTTCTGCTCGTCATCGTCTTACTCGTCTGCTCCATCGCCTTCGCAATCGCAGCAATCATCAAAGCTAGATCGCTAAAACGAGCTAGCGGCTCTCGAGCTTGGAAACTAACCGCATTCCAAAGACTAGATTTCACAGTCGATGACATTTTGAACTCCTTGAAAGAAGACAACATAATCGGAAAAGGAGGCGCAGGGATTGTTTACAAAGGTTTTATGCCGAGCGGTGATCATGTCGCCGTGAAAAGGCTTCCGGCTATGAGCCGTGGGTCGTCCCATGACCATGGATTCAACGCTGAGATACAAACTCTGGGGAGAATTAAACATCGCCACATCGTTAGATTATTGGGTTTCTGTTCAAATCACGAAACCAATCTCCTGGTTTATGAATACATGCCTAATGGGAGTTTAGGGGAAGTTCTTCACGGGAAGAAGGGCGGCCATTTGCAGTGGGACACAAGGTACAAAATCGCCATTGAAGCTGCTAAAGGTCTATGCTATTTACATCATGATTGTTCGCCATTGATTGTTCATCGAGATGTGAAATCAAACAACATTCTTCTGGATTCTGATTACGAAGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTTCTTCAGGATTCGGGTACATCAGAGTGTATGTCCGCCATAGCTGGTTCTTACGGATACATAGCTCCAGAATACGCTTATACATTGCGAGTGGACGAGAAGAGCGATGTTTATAGCTTTGGAGTAGTACTTTTAGAATTGGTGAGCGGGCGAAAGCCCGTCGGGGAATTCGGGGACGGGGTCGACATAGTTCAATGGGTTAGAAAAATGACGAGCCCCAACAACGAAGGGGTGATGAAAATCATCGATCCACGGCTGTCGTCGGTGCCGCTGAATGAAGTGAGTCATATGTTCTATGTAGCAATGCTGTGTGTGGAAGAGCAGGCAGTGGAGAGGCCAACAATGAGAGAAGTAGTTCAAATCCTGACAGAGCTGTCGAGGGCACCAAGCAGTAAAGAAGGCGAAGCAACATCGGCAATGTCACCACCGGGAACAACAGTGGCGTTGGATTCACCAAAGAAAACAACACAGCCACCGCCTGATCTTCTGAGCATTTGA 3012 47.08 MKLLLLLFLLLHLHTHLSLSSHLPEFRALLSLKTSLSDDSHSPLSNWDAATHHCTWTGVVCDFRRHVVGLDLSGLNLSGTLSPDVGSLRFLANLSLAANQISGPIPPEISAISPLKYLNLSNNLINGTFPLQLSFLKNLEVLDLYNNNMSGNLPLVVIELPNLRHLHLGGNFFSGVIPPEYGTWQFMEYLAVSGNELQGRIPPEIGNLTRLRELYIGYYNTYDGGLPPEIGNLSELVRLDAANCGLMGEIPRELGKLRKLDTLFLQVNGFSGPLIPELGSLTELKSMDLSNNILVGEIPDSFSQLKNLTLLHLFRNKLHGAIPQFIGELTELEVLQLWENNFTGSIPCNLGKNGKLVVLDISSNKLTGTLPPDMCHGNRLQTLITLGNFLFGPIPESLGRCESLSRIRMGENFLNGSIPKGLFSLPNLTQVELQNNFLTGEFPVTDSVSANLGQISLSNNRLSGSLPPMVGNFSGVQKLLLDGNKFSGQIPPEIGRLQQLSKIDFSHNKFSGQIAPEISQCKLLTFVDLSRNELSGEIPNEITTMRILNYLNLSRNHLIGSVPASISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGPCRNGVDNGTHPPHLKPSLSASVKLLLVIVLLVCSIAFAIAAIIKARSLKRASGSRAWKLTAFQRLDFTVDDILNSLKEDNIIGKGGAGIVYKGFMPSGDHVAVKRLPAMSRGSSHDHGFNAEIQTLGRIKHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLQWDTRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSDYEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELVSGRKPVGEFGDGVDIVQWVRKMTSPNNEGVMKIIDPRLSSVPLNEVSHMFYVAMLCVEEQAVERPTMREVVQILTELSRAPSSKEGEATSAMSPPGTTVALDSPKKTTQPPPDLLSI 1003
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 4852458 4856037 - Carg05851-RA Car16g00765 163917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00765 1003 MobiDBLite consensus disorder prediction 964 1003 - -
Car16g00765 1003 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Car16g00765 1003 Pfam Protein tyrosine and serine/threonine kinase 691 960 IPR001245 GO:0004672|GO:0006468
Car16g00765 1003 ProSiteProfiles Protein kinase domain profile. 689 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car16g00765 1003 Pfam Leucine Rich Repeat 162 179 IPR001611 GO:0005515
Car16g00765 1003 Pfam Leucine Rich Repeat 284 305 IPR001611 GO:0005515
Car16g00765 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00082 Car-Chr3:1047581 Car16g00765 Car-Chr16:4852458 1.50E-143 dispersed
Car03g00791 Car-Chr3:6561979 Car16g00765 Car-Chr16:4852458 0 dispersed
Car04g00323 Car-Chr4:1801546 Car16g00765 Car-Chr16:4852458 0 dispersed
Car07g00535 Car-Chr7:2720999 Car16g00765 Car-Chr16:4852458 0 dispersed
Car07g01251 Car-Chr7:7767423 Car16g00765 Car-Chr16:4852458 1.01E-152 dispersed
Car07g01339 Car-Chr7:8425717 Car16g00765 Car-Chr16:4852458 0 dispersed
Car09g00084 Car-Chr9:426464 Car16g00765 Car-Chr16:4852458 0 dispersed
Car09g00316 Car-Chr9:1754183 Car16g00765 Car-Chr16:4852458 2.25E-171 dispersed
Car16g00765 Car-Chr16:4852458 Car07g00534 Car-Chr7:2714563 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89443 PF07714 PK_Tyr_Ser-Thr 2.40E-46 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00765 - - cic:CICLE_v10024796mg 1602.8