Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car16g00769 ATGGCTGGGGGAGGAATGATCCGGCAGTTGCTGAGGAAATTTCCATCTCAATCTTCAACCCCTCCATTGGCCTCATCCCTTATTTCAAAGAATGAGGAAGCTAGCTTTGCTGGGATGAACTCCTTTAGAAGGCTTGCTCTCCTTGGAGCAGGCATTTCTGGATTTTTCAGTTTCGCAACTATAGCATCTGCTGATGAGGCAGAACATGGCTTGGAGTGCCCAAACTATCCCTGGCCTCACCAGGGCATCTTGAGTTCATATGATCATGCTTCGATTCGTCGTGGCCATCAGGTTTACCAACAAGTTTGTGCATCCTGTCATTCCATGTCTTTAATATCATACCGTGATTTGGTTGGTGTTGCATATACTGAAGAGGAGACAAAAGCAATGGCTGCTGAAATTGAGGTAGTTGATGGGCCCAATGATGAAGGTGAGATGTTCACTCGTCCAGGTAAACTCAGTGACCGGTTTCCTGAACCATATGCAAATGAACAAGCTGCTAGATTCGCTAATGGTGGAGCATATCCTCCAGATTTGAGCCTTATCACAAAAGCTCGTCATAATGGTCAGAATTATGTATTTTCCCTTCTTACTGGTTATCGTGATCCACCTGCTGGCGTTTCGATCCGAGAGGGTCTGCACTATAACCCTTATTTCCCTGGGGGAGCAATTGCGATGCCTAAGATGCTTAATGATGGAGCTGTCGAGTACGAAGATGGTACCCCAGCGACAGAAGCACAGATGGGTAAAGATGTTGTCTCGTTCTTGTCATGGGCTGCTGAACCAGAAATGGAAGAAAGGAAACTGATGGGATTCAAATGGATCTTCGTGCTCTCTCTGGCTCTACTTCAGGCCGCATATTATCGCCGATTGAAGTGGTCAGTTTTGAAGTCCCGCAAGCTGGTTCTTGATGTGGTCAATTAG 924 46.43 MAGGGMIRQLLRKFPSQSSTPPLASSLISKNEEASFAGMNSFRRLALLGAGISGFFSFATIASADEAEHGLECPNYPWPHQGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPEPYANEQAARFANGGAYPPDLSLITKARHNGQNYVFSLLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLKWSVLKSRKLVLDVVN 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 4888749 4893075 - Carg05855-RA Car16g00769 163921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car16g00769 307 Pfam Cytochrome C1 family 78 294 IPR002326 GO:0009055|GO:0020037
Car16g00769 307 ProSiteProfiles Cytochrome c family profile. 90 197 IPR009056 GO:0009055|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00757 Car-Chr4:4374193 Car16g00769 Car-Chr16:4888749 1.78E-12 transposed
Car16g00769 Car-Chr16:4888749 Car04g00800 Car-Chr4:4630965 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car16g00769 K00413 - csv:101215010 606.29